Endosymbiont 'TC1' of Trimyema compressum: AZF37_06715
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Entry
AZF37_06715 CDS
T07734
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
ett
Endosymbiont 'TC1' of Trimyema compressum
Pathway
ett03030
DNA replication
ett03430
Mismatch repair
ett03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ett00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AZF37_06715 (dnaE)
03430 Mismatch repair
AZF37_06715 (dnaE)
03440 Homologous recombination
AZF37_06715 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ett03032
]
AZF37_06715 (dnaE)
03400 DNA repair and recombination proteins [BR:
ett03400
]
AZF37_06715 (dnaE)
Enzymes [BR:
ett01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AZF37_06715 (dnaE)
DNA replication proteins [BR:
ett03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AZF37_06715 (dnaE)
DNA repair and recombination proteins [BR:
ett03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AZF37_06715 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
DUF6282
HROB
T2SSK
Motif
Other DBs
NCBI-ProteinID:
AMP20894
UniProt:
A0A191HVP5
LinkDB
All DBs
Position
complement(1102827..1106273)
Genome browser
AA seq
1148 aa
AA seq
DB search
MNNQFVHLHLHTEYSLLDGAIKIDELAENIKSKGMDAVAITDHGSMYGIVDFYRACIKVG
VKPIIGCEVYVAKDSRFRKEPGVDDGRYHLILLAENNVGYHNLMKIVSQSFTEGFYYKPR
VDKELLEKYSEGIIATGACMAGEVARRIREDNYEGAKKAALEYEAVFGKGNFFIEIQDHL
LEYEKTLNLGLIRLAKELDIPLVAANDSHYLERGDSYAHEILMCIQMGKTINDEHKMEFP
NKEFYVKSATEMIELFKNVPEAIENTVKIKDRCNVNIEFGESHLPDYKVPDGETLESYLE
KLCLEGVIKKYGAMTEEIRERLYYELGVINEMDYPGYFLIVWDTIAFAKEKGIYVGPGRG
SAAGSMVAYVLDITTIDPLKYDLIFERFLNPERISLPDIDTDFCYVRREEVIEYLIEKYG
EDHVAQIVTFGTMAARAVIRDVGRAMDIPLKDVDKVAKMVPNELKITLEKAMDTSLELQA
FCKERNDIEELIKIARRLEGMPRHTSTHAAAVVITPEPLKEYLPIKMEGEEYLTTQFPMN
TVEDIGLLKMDLLGLRTLTVIGETVEKIKENRGIAIDIEKIPLDDKKTFQLLATGNTSGL
FQLESKGMQAIIKQLKPDAFEEIIALVALYRPGPIGSGMIDDFIKRKHKQIEIEYLHPML
EPILNDTYGVILYQEQVMRIASQLGGFTLAEADNLRKAMGKKIPEMLEKSRQGFIEGCRK
NEIEEKTAEEIFRLMEYFAGYGFNKSHSAAYAMLAYETTYLKARYPVEFMASLLSSVIMS
STKVTQYILECKKMGICVLPPDVNESKEGFIVKENTIRFGLGAIKSVGISAIESILEARR
EGPFLDIDDFCRRVDLRTVGKKIMEYLSLSGAFSSFHIPRKALMAIVEDAVDLGQRFQKE
KDSNQISLFDIDDTLEEEEPTIVTTQEEFPLQELLQKEKEVLGFYVSAHPLEEYPDLMED
PDFYSLGDIEENDDKRKVIIRGVLNNIKEKKTRNNELMVTFSLEDETDSIECLIFPSFYA
EVKDLIKEGAVVAAGGRLQITEREDKCIIEKVVKPENYLTIKSYGTYNKKMQTRKNEGAV
QETVTVSIEDKSVTGLDALKRCLVFNKGDVPVILKINNKVIPLGNQYAIKNDERAIEALS
QFGEVIVK
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgaataaccaatttgtacatttgcatttacacactgaatatagtttgcttgacggtgct
attaagatagatgagttagcggaaaatataaaatctaaaggcatggatgctgtggctatt
acagaccatggttctatgtatggtattgtagatttttacagggcttgcatcaaggtcggc
gtaaagcctattataggctgcgaagtttatgttgcaaaagatagtcgtttcagaaaagag
ccaggtgtagatgacggtcgttatcatttaattttattagcagaaaacaatgttggttat
cataacttaatgaaaattgtttctcaaagttttactgaaggattttattataaacctaga
gtagataaagagctattagaaaaatacagcgagggtataatagcaaccggtgcttgtatg
gctggagaagtagctagaagaatccgtgaagataattacgaaggggcaaaaaaagctgct
cttgaatatgaagctgtttttggtaaaggtaatttttttattgaaatacaagatcattta
ctcgagtatgaaaaaactttaaatttgggattaattcgtttagccaaggagttggatata
cctttggttgcagctaacgattctcattatttagaaaggggagattcttacgctcatgaa
atacttatgtgtattcaaatggggaaaacgattaatgatgaacataaaatggagtttccc
aataaagagttttatgtgaaatctgctactgagatgattgagctttttaaaaatgttcca
gaagctattgaaaatacagtgaaaattaaagatcgctgcaatgttaatattgaatttggt
gaaagccatttgcctgattataaggtgccggatggagaaacattagaaagctatttagaa
aagctttgtcttgaaggcgttataaaaaaatatggggcaatgacagaggaaattagagaa
agactttattatgaactaggcgttataaatgaaatggactatcctggctatttcttaatt
gtctgggatacgattgcttttgctaaggaaaaggggatttatgttggaccaggaagagga
tctgctgctggtagtatggttgcttatgtgttagacattactacaattgatcctttgaaa
tatgatttgatttttgaacgatttttaaatcctgagcgtattagtttacctgatattgat
acagatttctgctatgttcgacgagaagaggtcattgaatatttaatagaaaaatatgga
gaggatcatgttgctcaaattgtaacttttggaacaatggccgcaagagctgttattaga
gatgtaggaagagcgatggatattccattaaaagatgtggataaagtagctaaaatggta
cccaatgagttgaaaataacacttgaaaaagcaatggacaccagtcttgaattacaggct
ttttgtaaagaacgaaatgatattgaagaattaatcaaaattgcaagacgtttagaaggc
atgccaaggcacacttctactcatgctgctgcagttgttattactccagaacccctgaag
gaatatctacctattaaaatggaaggtgaggaatatttaacaacccagtttccaatgaat
acagtagaagatattggtcttttaaaaatggacttactggggcttcgaacattaactgtc
ataggagagacagtggaaaaaatcaaggaaaatagagggatagcaattgatattgaaaaa
attcctctagatgataaaaaaacttttcaacttttagctacagggaataccagtggttta
tttcaattggaatcaaaagggatgcaggcaattattaaacaattaaaacctgatgccttt
gaagaaataatcgctttagtagctctctatagacccggaccaattggcagtggcatgatt
gatgattttattaaaagaaagcacaagcaaatcgaaattgagtatctccatccaatgtta
gagccaattctaaacgatacatatggtgttatcctatatcaggaacaagttatgcgtatt
gctagccaattaggtggctttacattggcagaagcagataatttaaggaaagctatgggt
aaaaaaatacctgaaatgcttgaaaaaagcagacaaggttttattgaaggctgtagaaaa
aatgaaattgaggagaaaacagcagaggaaatatttcgtttaatggagtattttgcaggc
tatggatttaataaatcccacagtgctgcctatgcaatgctagcttatgaaactacttac
ttaaaagcccgttatccagtagaatttatggcgtctcttttatcaagtgtaattatgtct
tcaacaaaagttactcagtatattcttgagtgtaaaaaaatgggtatttgtgttttacct
ccagatgttaacgaaagtaaggaaggttttattgttaaagaaaatacaatacgttttggt
ttaggcgctattaaaagtgtgggtatttcagcaatagaatctattttagaggcacgtcga
gaaggtccttttctggatattgatgatttttgtaggcgcgttgatttaagaactgtaggc
aagaagattatggaatatttatccttatcaggtgccttttcttcttttcatattcccaga
aaagcattaatggctattgttgaagatgctgtagacttaggacagcgttttcaaaaagaa
aaagatagcaatcagatttccttatttgatattgacgatactttggaagaagaagaaccc
actatagtgacaacacaggaggaattccctctacaggaactactacaaaaagaaaaagaa
gttttaggattttatgtttcagcccatcctttagaagaatacccagatttaatggaggat
ccagatttttatagtcttggagatattgaagaaaatgatgataaaagaaaagtaattatc
agaggggttttaaataatattaaagaaaagaaaactagaaataatgaactaatggttact
tttagcctagaagatgagacggattcaatagagtgcttaatatttccttctttttatgct
gaagtaaaagatttaattaaagaaggtgctgtagtagccgcaggggggcgtttgcaaata
actgagagggaagataagtgtattattgaaaaggttgttaaaccagaaaattatttaact
attaaaagctatggaacttataataaaaaaatgcagactagaaagaatgaaggtgctgta
caggaaactgtgacagtatccattgaagataagagtgttactggtttggatgctttaaaa
aggtgtctggttttcaataagggggatgtgccagttattttaaaaattaacaataaagtt
attcctcttggcaatcaatatgcaattaaaaatgatgaaagagctattgaggcgctgtct
caatttggagaggtaatagtaaaatga
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