Endosymbiont 'TC1' of Trimyema compressum: AZF37_07545
Help
Entry
AZF37_07545 CDS
T07734
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
ett
Endosymbiont 'TC1' of Trimyema compressum
Pathway
ett03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ett00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AZF37_07545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ett03400
]
AZF37_07545
Enzymes [BR:
ett01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AZF37_07545
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AZF37_07545
DNA repair and recombination proteins [BR:
ett03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AZF37_07545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
NFACT_N
zf-FPG_IleRS
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
AMP21034
UniProt:
A0A191HW63
LinkDB
All DBs
Position
complement(1229808..1230614)
Genome browser
AA seq
268 aa
AA seq
DB search
MPELPEVENIVMSVATLLENQQIEFIEILDSVVVSGDIDLFRSNVEGQRIKHLNRKGKYI
IFEMEKGYVILHLRMTGQLLKGDLEDKHTHLKIHLANGKIVSYRDIRKFGGFFFLEKEQL
NAYFESRLGLEPLKMTYEEFNGALKKAKGSIKKILLDQKIIAGIGNIYADEILFYAGIHP
QKNVEYFSKRRKEKLYEGIYVVLQTAIEEGGSSIRDYVNSEGKEGGFQDQHQVYGRKGKG
CYVCKTPLKKITVAGRTTVYCPQCQTKR
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaagttgaaaacattgtaatgtctgtggctacacttcttgaaaat
cagcagatagaatttatagaaatattagattcagttgttgtaagtggagatatagatcta
tttagaagcaatgttgaaggtcaaaggattaaacatttaaatagaaaagggaaatatata
atttttgaaatggaaaaaggctatgttattcttcacttaagaatgacaggacaattatta
aaaggtgatttagaggataagcacacccatttgaaaattcatctagccaatgggaagatt
gttagctatcgagatatcagaaaatttggaggcttttttttcttggagaaggaacagcta
aatgcttactttgaatccaggctaggattagaacctcttaaaatgacttatgaagaattt
aatggggctcttaagaaagctaaggggtcaataaagaagattctcttagatcagaaaata
attgcaggtattggcaatatttatgcagatgaaatattattttatgctgggattcatccc
cagaagaatgtagaatactttagtaagagacggaaagaaaagctctatgaagggatttat
gttgttctgcaaacagctatagaggaaggtggttcttctatacgggattatgttaacagc
gaaggtaaggaaggtggttttcaagatcagcatcaagtttatggtcgtaagggaaaaggt
tgctatgtctgtaaaacacctttgaaaaaaataacagtggctggtcgaacaactgtttat
tgtcctcagtgtcagactaagaggtga
DBGET
integrated database retrieval system
