Endosymbiont 'TC1' of Trimyema compressum: AZF37_08860
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Entry
AZF37_08860 CDS
T07734
Symbol
gyrB
Name
(GenBank) DNA topoisomerase IV subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ett
Endosymbiont 'TC1' of Trimyema compressum
Brite
KEGG Orthology (KO) [BR:
ett00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ett03032
]
AZF37_08860 (gyrB)
03400 DNA repair and recombination proteins [BR:
ett03400
]
AZF37_08860 (gyrB)
Enzymes [BR:
ett01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
AZF37_08860 (gyrB)
DNA replication proteins [BR:
ett03032
]
Prokaryotic type
DNA Topoisomerases
AZF37_08860 (gyrB)
DNA repair and recombination proteins [BR:
ett03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AZF37_08860 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
TOPRIM_C
HATPase_c_3
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
AMP21238
LinkDB
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Position
complement(1456726..1458645)
Genome browser
AA seq
639 aa
AA seq
DB search
MGETKIEKKESYDASQIQVLEGLEAVRKRPGMYIGSTSARGLHHLVYELVDNSIDEALAG
YCNQIRVIIGTDKTITVIDNGRGIPVDIHPKLKKPAVEVALTILHAGGKFGGGGYKVSGG
LHGVGMSVVNALSEWLEVEISRNGKIYRQKFKRGITDSPLEVINENITGTGTKITYKADN
TIFETDEYDFLTLAHRLRELSFLNKGLTLVLEDKRTGTEETFFHEGGIVDFVKYLNRNKE
VNFKTPVYIAGFKDDVDVEIAIQYHDGYVENILSYTNNIHTIEGGTHEVGFKTALTRVMN
DYGRKKVIIKEKENNLSGEDIREGITAVVSVKVIDPQFEGQTKTKLGNSEVRGIVETIMG
EQLATFLEENPSVGKKIIEKGIMASRAREAARKARDLTRRKNALEISGLPGKLADCSISD
PNMCEIFIVEGNSAGGSAKMGRDRNTQAILPLRGKILNVEKSRIDKILGNNEIKMMITAL
GTGIQDDFDIDKLRYRKVVIMTDADVDGSHIRTLMLTFFFRYMRQLIDCGCVYIAQPPLF
KIKHGKKEHYVYTDQELEQLLGTLPDNNYELQRYKGLGEMNPEQLWDTTMNPESRTLLQV
TVDDAAEADGIFTVLMGDQVEPRKAYIQDNAHRVTNLDI
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaactaaaatagaaaaaaaagaaagttatgatgccagtcagattcaggtatta
gagggacttgaggctgtacgcaaaagacccggcatgtacattggtagtacaagtgctcgg
ggacttcatcacttagtatatgaacttgttgacaatagcattgatgaggcactggcaggt
tactgtaatcagatacgtgttattattggaaccgataaaaccattacagttattgataat
ggtagagggataccagttgacattcatccaaaattaaagaaaccggcagttgaagtagct
ttgactatactccatgccggaggaaaattcggtggtggtggttataaagtgtctggagga
cttcacggagtaggtatgagtgttgtaaatgctctatctgaatggttagaagttgaaatt
agcagaaatggtaagatctatagacagaaatttaaaagagggattaccgatagtccttta
gaagttatcaatgaaaatattactggaacaggtactaaaattacctataaagcagataat
acaatttttgaaactgatgaatatgattttttaacattggcccatcgcttaagagagctt
tcttttttaaataagggattaactctagttttggaagataaaagaacaggaactgaagag
actttcttccatgaaggtggcattgttgattttgttaaatatcttaatagaaataaagaa
gttaattttaaaactccagtatatattgctggctttaaagatgatgtagatgttgagatt
gcaattcagtatcatgatggctatgttgagaatattctttcctatacaaataatattcat
actattgagggtggaacccatgaagttggttttaaaacagctttaactcgtgttatgaat
gattatggtagaaaaaaagttattattaaggaaaaagaaaataatctttcaggtgaggac
attagagaaggtattacagctgttgtcagtgtaaaagttattgatcctcagtttgaagga
caaactaaaacaaaactaggtaatagtgaagtaagaggtattgttgaaaccattatggga
gagcaattagctacttttcttgaggaaaatcctagtgttggtaagaaaattattgaaaaa
ggaattatggctagtcgtgcaagagaagctgctcgtaaggctagagatttgactagaaga
aaaaatgctcttgaaatttccggattacctggtaagttagctgactgttctatttcagac
cctaatatgtgtgaaatctttattgtagaggggaattctgcgggaggttctgcaaaaatg
ggaagggataggaatacacaggctattttgcctttaagaggcaaaattctcaatgtagag
aaatcaagaattgataagattttaggtaataatgaaattaaaatgatgattacagcattg
ggaactgggattcaagatgattttgatattgataaattacgttatagaaaagtggtaatt
atgactgatgctgatgtcgatggtagtcatattagaacattgatgttaacatttttcttt
cgctacatgagacaactaattgactgtggctgtgtttatattgcgcaaccgcctttattt
aaaataaagcatggtaaaaaagagcattatgtttatactgatcaggaattagagcagttg
ttaggtactttaccagacaataactatgagctacaacgctataaaggccttggggaaatg
aaccctgagcaactatgggataccacaatgaatccagaatcgagaacattgctccaagtg
actgttgatgatgctgcagaagctgatggtatttttacagtcctcatgggtgatcaagta
gagcctagaaaggcctatattcaagataatgcccatagagtaacaaacttagatatttaa
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