Escherichia coli O157 H7 TW14359 (EHEC): ECSP_0063
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Entry
ECSP_0063 CDS
T00949
Symbol
hepA
Name
(GenBank) RNA polymerase-associated helicase protein (ATPase and RNA polymerase recycling factor)
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
etw
Escherichia coli O157:H7 TW14359 (EHEC)
Brite
KEGG Orthology (KO) [BR:
etw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
etw03021
]
ECSP_0063 (hepA)
Transcription machinery [BR:
etw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
ECSP_0063 (hepA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
Helicase_C
SNF2-rel_dom
ResIII
DEAD
Cas3-like_C_2
AAA_34
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
ACT69958
LinkDB
All DBs
Position
complement(65271..68177)
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AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAVDARTVTLLFPSTGENRLYARSDSPVTRVMFNPGDT
ITSHDGWQMQVEEVKEENGLLTYIGTRLDTEESGVALREVFLDSKLVFSKPQDRLFAGQI
DRMDRFALRYRARKYSSEQFRMPYSGLRGQRTSLIPHQLNIAHDVGRRHAPRVLLADEVG
LGKTIEAGMILHQQLLSGAAERVLIIVPETLQHQWLVEMLRRFNLRFALFDDERYAEAQH
DAYNPFDTEQLVICSLDFARRSKQRLEHLCEAEWDLLVVDEAHHLVWSEDAPSREYQAIE
QLAEHVPGVLLLTATPEQLGMESHFARLRLLDPNRFHDFAQFVEEQKNYRPVADAVAMLL
AGNKLSNDELNMLGEMIGEQDIEPLLQAANSDSEDAQSARQELVSMLMDRHGTSRVLFRN
TRNGVKGFPKRELHTIKLPLPTQYQTAIKVSGIMGARKSAEDRARDMLYPERIYQEFEGD
NATWWNFDPRVEWLMGYLTSHRSQKVLVICAKAATALQLEQVLREREGIRAAVFHEGMSI
IERDRAAAWFAEEDTGAQVLLCSEIGSEGRNFQFASHMVMFDLPFNPDLLEQRIGRLDRI
GQAHDIQIHVPYLEKTAQSVLVRWYHEGLDAFEHTCPTGRTIYDSVYNDLINYLASPDQT
EGFDDLIKNCREQHEALKAQLEQGRDRLLEIHSNGGEKAQALAESIEEQDDDTNLIAFAM
NLFDIIGINQDDRGDNMIVLTPSDHMLVPDFPGLSEDGITITFDREVALAREDAQFITWE
HPLIRNGLDLILSGDTGSSTISLLKNKALPVGTLLVELIYVVEAQAPKQLQLNRFLPPTP
VRMLLDKNGNNLAAQVEFETFNRQLNAVNRHTGSKLVNAVQQDVHAILQLGEAQIEKSAR
ALIDAARNEADEKLSAELSRLEALRAVNPNIRDDELTAIESNRQQVMESLDQAGWRLDAL
RLIVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgaattgggacttgga
accgttgtcgcggtggatgcgcgaactgtcactttacttttcccatctactggtgaaaac
cgtctgtacgcacgcagtgattcccccgtgacccgcgtgatgttcaaccctggtgatacc
attaccagccatgacggctggcagatgcaagtcgaagaagtaaaagaagaaaatggcttg
ctgacctatatcggtactcgcctggatactgaagagtccggcgtagccctgcgtgaagtt
ttccttgatagcaaactggtgttcagcaaaccgcaggaccgcctgtttgccgggcagatt
gaccgtatggaccgctttgcgctgcgttatcgcgcgcgtaagtattccagcgaacagttc
cgtatgccgtacagcggcctgcgcggtcagcgtaccagcctgatcccgcaccagctcaac
atcgctcatgatgttggccgccgccacgcgccgcgcgtcctgctggctgacgaagtgggt
ttagggaaaaccattgaagccgggatgatccttcatcagcaactgctctctggcgctgct
gaacgtgtgctgattatcgtcccggaaaccttacagcatcagtggctggtagaaatgctg
cgccgtttcaacctgcgctttgcgctgtttgatgatgagcgttatgccgaagctcagcac
gatgcttacaacccgttcgacaccgaacagctggtgatttgctcgctggattttgcccgc
cgtagcaaacagcgtctggaacatctctgtgaagccgagtgggacctgctggtggtcgat
gaagcgcatcacctggtgtggagcgaagacgcgccgagccgcgaatatcaggctattgaa
caactggcagagcacgtgccgggcgttctgctgctgaccgcaaccccggaacagctggga
atggaaagccacttcgcccgtctgcgtctgctggacccgaaccgtttccacgatttcgcg
caattcgttgaagagcagaaaaattatcgtccagtagcggacgccgttgccatgctgctg
gcaggtaacaaactgagcaatgacgaactgaacatgcttggcgagatgatcggcgagcag
gatatcgagccgctgttgcaagcagcaaacagcgacagcgaagatgcccagagcgcccgt
caggagctggtttcgatgctgatggatcgccacggcaccagccgcgtgctgttccgtaac
acccgtaacggtgtgaaaggcttcccgaaacgcgagctgcacaccattaagctgccgcta
ccgacgcagtatcagacggctattaaagtctccggcattatgggcgcacgtaaaagtgcg
gaagaccgcgcccgcgatatgctctacccggagcgtatttatcaggaatttgaaggtgat
aacgccacctggtggaacttcgatccgcgcgttgagtggctgatgggctacctgaccagc
catcgctctcagaaagtgctggtgatctgcgctaaagctgccactgcgctgcaactggag
caagtactgcgcgaacgtgaaggtattcgcgctgcggtgttccacgaaggtatgtcgatt
atcgaacgtgaccgcgctgccgcctggtttgccgaagaagacaccggcgcacaggtactg
ctgtgctcagaaatcggttctgaaggacgtaacttccagttcgccagccacatggtgatg
tttgacctgccattcaacccggatctactggagcagcgtattggtcgtctggatcgtatc
ggccaagcgcacgatattcagatccatgtgccttatctggagaaaaccgctcagtcggtg
ctggtgcgctggtatcacgaaggtctggatgcatttgagcacacctgcccgaccggacgc
actatttacgatagcgtatacaacgatctgattaactatctggcttcaccggatcaaacc
gaaggctttgacgatctgatcaaaaactgccgcgagcaacatgaagcgctgaaagcacag
ctggaacagggtcgtgaccgcctgctggaaatccactccaacggtggcgaaaaagcccag
gcactggcagaaagcattgaagagcaggatgacgataccaacctgatcgccttcgccatg
aacctgttcgatattatcggtatcaatcaggacgatcgcggcgacaacatgatcgtgctg
acgccgtccgatcatatgctggtgccggacttccctggcctgtcggaagatggcatcacc
atcacctttgatcgtgaagtggcgctggcgcgtgaagatgcgcagtttattacctgggaa
catccgctgatccgcaacggtctggatctgattctttctggcgataccggtagcagcacg
atttcactgttaaaaaacaaagcgttgccggtaggtacgctgttggtggaactgatttat
gtggttgaagcccaggctccgaagcagttgcagctcaaccgcttcctgccaccgacgccg
gtacgtatgctgctggataaaaacggcaacaacctggcggcgcaggtagagtttgaaacc
tttaaccgccagcttaacgcggttaaccgtcacaccggcagcaaactggttaacgccgtg
cagcaggatgttcacgctatccttcaactgggtgaagcgcagatcgagaaatctgcccgt
gcattgattgatgcagcacgtaacgaagccgacgaaaaactgtctgccgagctgtctcgt
ctggaagctctgcgtgcagtgaacccgaacattcgtgacgacgaactgaccgccattgag
agcaaccgtcagcaggtaatggaaagcctggatcaggcaggttggcgtctggatgccctg
cgtttgatcgttgtaacgcatcagtaa
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