Escherichia coli O157 H7 TW14359 (EHEC): ECSP_2520
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Entry
ECSP_2520 CDS
T00949
Symbol
sdiA
Name
(GenBank) DNA-binding transcriptional activator
KO
K07782
LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
Organism
etw
Escherichia coli O157:H7 TW14359 (EHEC)
Pathway
etw02020
Two-component system
etw02024
Quorum sensing
etw02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
etw00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ECSP_2520 (sdiA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ECSP_2520 (sdiA)
02026 Biofilm formation - Escherichia coli
ECSP_2520 (sdiA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
etw03000
]
ECSP_2520 (sdiA)
Transcription factors [BR:
etw03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
ECSP_2520 (sdiA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
HTH_20
Sigma70_r4
HTH_23
HTH_10
Motif
Other DBs
NCBI-ProteinID:
ACT72327
LinkDB
All DBs
Position
complement(2524972..2525694)
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AA seq
240 aa
AA seq
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MQDTDFFSWRRTMLLRFQRMETAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFY
TNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFNEAQPLWEAARAHGLRRGVT
QYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNF
SKREKEILRWTAEGKTSAEIAMILSISENTVNFHQKNMQKKINAPNKTQVACYAAATGLI
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgcaggatacggattttttcagctggcgtcgcacgatgctgttgcgttttcagaggatg
gagaccgcagaagaggtctaccatgaaattgagcttcaggctcagcagctggagtacgat
tactattcgttatgtgtccgccacccggtaccattcactcgacctaaagtggctttctac
accaattaccctgaggcgtgggttagttattatcaggcaaaaaactttctcgcaattgat
ccggtgctgaaccctgaaaactttagtcagggccatctaatgtggaatgatgacttattc
aacgaagcacagccgttatgggaagccgcgcgcgcacatggtttacgccgcggtgtcact
cagtatttaatgctgccaaaccgggcgctgggctttttgtccttttcccgttgcagcgcg
cgcgaaatacccattcttagtgatgaactgcaattaaaaatgcagttactggtgcgcgaa
agtctgatggctctgatgcgtttaaatgatgaaatagtgatgacgccagagatgaatttc
agcaagcgcgaaaaagaaattctgaggtggacggcggaagggaagacatcagcagagata
gcgatgattttgtcaatctctgagaatacggtcaatttccaccagaaaaacatgcagaaa
aaaattaatgcaccaaataagacccaggttgcctgttacgcggccgctactggcttaatt
tga
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