Escherichia coli O157 H7 TW14359 (EHEC): ECSP_4141
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Entry
ECSP_4141 CDS
T00949
Symbol
truB
Name
(GenBank) tRNA U55 pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
etw
Escherichia coli O157:H7 TW14359 (EHEC)
Brite
KEGG Orthology (KO) [BR:
etw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
etw03016
]
ECSP_4141 (truB)
Enzymes [BR:
etw01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ECSP_4141 (truB)
Transfer RNA biogenesis [BR:
etw03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ECSP_4141 (truB)
Prokaryotic type
ECSP_4141 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ACT73878
LinkDB
All DBs
Position
complement(4112138..4113082)
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDINGVLLLDKPQGMSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDVDGQIVEERPVTFSAEQLAAALDTFRGDIE
QIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEHLRELVEQAEQQDIPAAELLDPL
LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAPLEGLVRVTEGENGKFIGMGEIDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgacattaacggcgttttgttgctggataaaccg
cagggtatgtccagcaacgatgcgctgcaaaaagtgaaacgtatatataacgccaatcgt
gccgggcataccggtgcgctggacccgctggcgaccggcatgttgccgatttgcctcggg
gaagcgacgaagttttcccagtatctgctggactccgacaaacgctatcgggtcattgcg
cgtcttggacagcgtaccgatacttctgacgtcgacggacaaatcgttgaagagcgtccg
gtaacctttagtgcagaacaactggcggcggcactggatactttccgtggcgatatcgaa
cagatcccatcgatgtattcagcactgaaataccagggcaaaaaactgtacgaatatgcg
cgtcagggcattgaagttccgcgtgaagcgcgtccaattaccgtttatgaattgctgttt
attcgccatgaaggcaatgagctggagctggaaattcactgctcaaaaggcacttatatc
cgcaccatcattgatgacctgggtgaaaaactcggctgtggcgcgcatgtgatttacctg
cgtcgtctggcggtaagtaaatatccggttgaacggatggtgaccctggagcacctgcgt
gaactggtcgaacaagccgaacagcaggatattccggctgcggagttgcttgatccatta
ctgatgccaatggacagtccagcttcggactacccggtggtgaatcttccgttaacgtct
tctgtttacttcaaaaatggtaacccggttcgtacatctggcgcgccgctggaaggactg
gttcgcgttacggaaggtgagaacggcaagtttatcggtatgggcgaaattgacgatgaa
ggccgcgttgcgcctcgtcgtctggtggttgaatacccggcgtaa
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