Escherichia coli O157 H7 TW14359 (EHEC): ECSP_5000
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Entry
ECSP_5000 CDS
T00949
Symbol
priA
Name
(GenBank) Primosome factor n' (replication factor Y)
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
etw
Escherichia coli O157:H7 TW14359 (EHEC)
Pathway
etw03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
etw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ECSP_5000 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
etw03400
]
ECSP_5000 (priA)
Enzymes [BR:
etw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ECSP_5000 (priA)
DNA repair and recombination proteins [BR:
etw03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ECSP_5000 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA-like_WH
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
AAA_22
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
ACT74698
LinkDB
All DBs
Position
complement(4985277..4987475)
Genome browser
AA seq
732 aa
AA seq
DB search
MPVAHVALPVPLPRTFDYLLPEGMAVKAGCRVRVPFGKQQERIGVVVSVSDVSELPLNEL
KAVVEVLDSEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA
TEQGHAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET
PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN
VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV
IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA
LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQADNQ
VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQQHLRCHHCDSQRPVPRQCPSCG
STHLVPVGLGTEQLEQTLAPLFPGVPISRIDRDTTSRKGALEQQLAEVHRGGARILIGTQ
MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTHH
PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRAEDHNNQHAPLFLQQLRNLI
LSSPLADDKLWVLGPVPALAPKRGGRWRWQILLQHPSRVRLQHIINGTLALINTIPDSRK
VKWVLDVDPIEG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttgcccacgttgccttgcccgttccgcttcctcgtacctttgactatctcctg
ccagaaggcatggcggttaaagccgggtgtcgcgtgcgcgtgccgtttggcaaacagcag
gagcgcatcggggttgtggtgtcagttagcgacgtcagtgagctgccgcttaacgagcta
aaagcggtagtcgaagtgctggatagtgagccggtgtttactcactccgtctggcgattg
ctgctctgggcggcggattactatcatcatccgattggcgatgtgctgtttcatgccttg
ccgattttactgcgccaggggcggcctgcggcgaacgcgccgatgtggtactggtttgcc
actgaacaaggccatgcggtggatctgaacagcctgaaacgttcgccaaagcaacaacag
gcactggcggcattgcggcaaggcaaaatctggcgcgaccaggttgccacgcttgaattt
aatgatgccgcgttacaggcgctgcgcaaaaaaggtctgtgtgatttagcaagtgaaaca
ccagagtttagcgactggcgaacgaactatgccgtttctggtgaacggttgcgattgaat
accgaacaggccaccgccgttggcgcaattcatagcgcggcggataccttctctgcttgg
ctgctggcgggcgttacaggttccggtaaaacagaggtttatttgagcgtactggaaaac
gtgctcgctcagggcaaacaggcgctggtgatggtgccggaaatcggcctgacaccgcaa
actatcgcccgttttcgtgaacgttttaatgcccccgtagaagttctgcattccggcctg
aacgacagcgagcgtctttcggcgtggttgaaagcgaaaaatggtgaggcggcgattgtc
atcggcacccgctccgcgctgtttacgccgtttaaaaatctcggtgtgattgtcattgat
gaagagcacgacagttcctacaagcagcaggaaggctggcgctatcatgcccgcgacctg
gcggtttatcgtgcgcacagcgagcaaatcccgattattcttggctccgcaacacccgca
ctggaaacgttatgcaacgtccagcagaaaaaataccgcctgctgcgcctgacgcgtcgg
gcggggaatgcgcgtccggcaattcaacatgtgctggatttaaaaggtcagaaggtgcag
gcggggctggctccggcgttaatcacccgtatgcgccagcatttacaggccgacaaccag
gttatcctctttcttaaccgccgtggctttgcgcctgccttgctgtgccacgactgcggc
tggattgccgaatgtccacgttgcgatcactactacacgctgcatcaggcgcaacagcat
ttgcgctgtcaccactgtgacagccaacgcccggtgccgcgccagtgcccttcctgcggt
tccacgcacctggtacccgtggggctgggcaccgaacagcttgaacagacgctcgcgccg
ttattccctggtgtgcccatttctcgtatcgaccgcgataccaccagccgcaaaggagcg
ctggaacaacaactggcggaagtgcatcgcggcggcgcgaggatattgattggcacgcaa
atgctggcgaaaggtcaccactttccggatgtgacgctggtagcgttactggatgtggac
ggcgcgctgttttctgccgattttcgctcggcagagcgttttgcccagctatacacccag
gtagcaggccgtgccgggcgtgcgggtaaacagggcgaagtggtgctgcaaacgcatcat
ccggaacacccgctattgcaaacgttgctctataaaggctacgacgcttttgccgaacag
gcactggctgagcggcgaatgatgcaactgccgccgtggaccagccatgtgattgtgcgt
gcggaagatcataacaatcagcacgcgccattgttcctgcaacaactgcgtaatctgatc
ctctccagcccgctggcagacgacaaattgtgggttctcggtccggttccggcactggca
cctaaacgtggcggtcgctggcgctggcagatattgttgcagcacccttcccgcgtgcgc
ttgcaacacatcattaacggtacgctggcactcatcaatacaataccggattcccgtaag
gtgaaatgggtgctggatgttgatccgattgagggttaa
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