Escherichia coli O157 H7 TW14359 (EHEC): ECSP_5342
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Entry
ECSP_5342 CDS
T00949
Symbol
treR
Name
(GenBank) DNA-binding transcriptional repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
etw
Escherichia coli O157:H7 TW14359 (EHEC)
Brite
KEGG Orthology (KO) [BR:
etw00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
etw03000
]
ECSP_5342 (treR)
Transcription factors [BR:
etw03000
]
Prokaryotic type
Helix-turn-helix
LacI family
ECSP_5342 (treR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_23
HTH_3
HTH_31
HTH_IclR
HTH_7
MarR_2
HTH_Tnp_ISL3
AAA_18
HTH_28
HTH_Crp_2
HTH_26
CENP-B_N
MarR
TrmB
Peripla_BP_4
HHH
HTH_AraC
HTH_17
HTH_38
Motif
Other DBs
NCBI-ProteinID:
ACT75022
LinkDB
All DBs
Position
complement(5353081..5354028)
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AA seq
315 aa
AA seq
DB search
MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQRTRERVEAVMNQHGFSPSRSARAMRGQ
SDKVVAIIVTRLDSLSENLAVQTMLPAFYEQGYDPIMMESQFSPQLVAEHLGVLKRRNID
GVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDEGAIKILMQRLYDQGHRNISY
LGVPHSDVTTGKRRHEAYLAFCKAHKLHPVAALPGLAMKQGYENVAKVITPETTALLCAT
DTLALGASKYLQEQRIDTLQLASVGNTPLMKFLHPEIVTVDPGYAEAGRQAACQLIAQVT
GRSEPQQIIIPANLS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcggctgaccatcaaagacatcgcgcgcttaagcggcgtggggaaatctaca
gtttcccgggtgctgaataacgaaagcggcgtgagccagcgcacccgcgagcgtgttgaa
gcagtgatgaatcagcatggattttccccttcccgttctgcgcgcgctatgcgtgggcaa
agcgataaagtggtcgccatcattgttacccgtctggattcgttgtcagaaaatctcgcc
gttcaaaccatgctgccagcgttctatgaacaaggttacgacccaatcatgatggaaagt
cagttttccccgcaattagttgccgaacatttgggggtgctgaaacggcgtaatatcgac
ggcgtagtgctgttcggttttactggcataacagaagaaatgttagcccactggcagtca
tcgctggttctgctggcgcgtgacgcaaaaggctttgcttcggtctgttatgacgacgaa
ggggcaatcaagatcctgatgcaacggctgtatgaccaggggcatcgtaatatcagttat
ctcggcgtgccgcacagtgacgtgacaaccggtaagcgacgtcacgaagcctacctggcg
ttctgcaaagcgcataaactgcatcccgttgccgccctgccagggcttgctatgaagcaa
ggctatgagaacgtagcaaaagtgattacgcctgaaactaccgccttactgtgcgcaacc
gacacgctggcacttggcgcaagtaaatacctgcaagagcaacgcatcgacaccttgcaa
ctggcgagcgtcggtaatacgccgttaatgaaattccttcatccggagatcgtcaccgta
gatcctggttacgccgaagctggacgccaggcggcttgccagttgatcgcgcaggtaacc
ggacgcagcgaaccgcaacaaatcatcatccccgccaacctgtcctga
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