Faecalitalea cylindroides: EC1_03330
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Entry
EC1_03330 CDS
T02586
Name
(GenBank) Superfamily I DNA and RNA helicases
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
euc
Faecalitalea cylindroides
Pathway
euc03420
Nucleotide excision repair
euc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
euc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EC1_03330
03430 Mismatch repair
EC1_03330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
euc03400
]
EC1_03330
Enzymes [BR:
euc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EC1_03330
DNA repair and recombination proteins [BR:
euc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EC1_03330
MMR (mismatch excision repair)
Other MMR factors
EC1_03330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
UvrD_C_2
AAA_19
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
PhaC_N
UPF0149
Motif
Other DBs
NCBI-ProteinID:
CBK88055
UniProt:
D4JCY3
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All DBs
Position
complement(315195..316889)
Genome browser
AA seq
564 aa
AA seq
DB search
MAIAMAETDNSEQLANIYKFYEDARLEMKAMDFDDLLIEAHKLLNHNVDVRTKWQNRLDY
IHVDEFQDVDPVQYGIIRLITGKHAFLCVVGDPDQTIYTWRGASVDIILRFNKDFENCET
VILDQNYRSTKPILEASNKVISYNQDRIKKDLYTQIPGDDKILLHASSEEGDEPLFVARE
ISKRHKNGIDYKDIAILYRSNYSSRSFERVFRTVGIPYIIYGGIRFYERQEIKDALAYLK
LCTYPDENDPEQFSLDLAILRVINQPRRGIGQKSIDALREEAASRHINLFEEMRDPLDIS
NAIKRKCEGFVSLILDLRSHRKDYSLEDFLDYVLDKTGYLKMLEDENETERIENLKELKS
DIAQSLKEDPDMTLETYLQDVSLFTDKTSDLALNSVSLMTVHAAKGLEFDTVFLVNFNDG
IFPSARSVQEGGRKSLEEERRLCYVAMTRAKRNLIITWNTGYSYMLDTYKTSSRFLMEIP
KEYTYDDKPKPKVEYTSNMMQSSMSPSKQTMKKNQKFRKGDLVDHSVYGQGVVLKIEGNV
ATVAFSHKFGVKKLNASHPSLKKA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atggctatagccatggctgaaacggataattctgagcagcttgccaatatctataaattt
tatgaagatgctcgcttagaaatgaaagctatggattttgatgatctattgatcgaagca
cataaacttttaaatcataatgttgatgtaagaacaaaatggcaaaatcgtttagattat
attcatgttgatgaatttcaggatgtcgatcctgttcaatatggcattattcgtttgatt
acaggaaaacatgcttttttatgtgttgtaggagatccagatcaaaccatttatacttgg
cgtggtgcaagcgtagatatcattcttcgctttaataaagattttgaaaattgtgaaacc
gtgatcttggatcaaaattatcgttctacaaaaccaattcttgaagccagcaataaagtt
atttcgtataatcaagatcgtatcaaaaaagatttatatacacagattccaggcgatgat
aagatcttgctgcatgcatcaagtgaagaaggggatgaacctttatttgtcgcaagagaa
atatcgaaacgacataaaaatggaatagactataaagatatagccattctataccgctca
aactatagttccagatcttttgaacgtgtatttcgaacagtggggattccttatattatt
tatggtggaattcgtttttatgaaagacaggaaattaaagatgctttggcgtatttaaag
ctttgtacatatcctgatgaaaatgatcctgaacaattctctttagatcttgcgatcttg
cgtgtcattaatcagcctagacgaggcattggtcaaaaatctatagatgcgctacgcgaa
gaagctgcaagtcgacatatcaatctttttgaagagatgagagatcctttagatatttcg
aatgcaattaaacgaaaatgtgaaggttttgtttcacttattttggatttaagaagtcat
cgtaaagattattcattagaagattttttggattatgtattggataagactggatattta
aaaatgttagaagatgaaaatgaaacagaacgaattgagaacttaaaggaacttaaatcc
gatattgcccagtctttaaaagaagatccggatatgactttagaaacatatttgcaggat
gtgtctttatttaccgataaaacttcggatttggcattgaattctgtttcattgatgaca
gttcatgcggctaaaggacttgaatttgatacagtattccttgtgaattttaatgatgga
atctttccaagtgcaagatccgttcaagaagggggaagaaagtcacttgaagaagaaaga
cgcttgtgttatgttgcgatgactcgtgcaaaacgaaatttgatcattacatggaataca
ggctattcatacatgctggatacatataagacctcatcgaggttcttaatggagataccc
aaagaatatacttatgacgataagccaaaaccaaaagttgaatatacatccaatatgatg
caaagttctatgagtccatctaaacaaactatgaaaaagaatcaaaaatttcgtaaagga
gacttggtcgatcatagtgtttatgggcagggtgttgtattgaaaattgaaggaaatgta
gcaacagttgcttttagccataaatttggagtaaagaaattgaatgctagtcatccgtct
ttgaaaaaagcatga
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