Faecalitalea cylindroides: EC1_15660
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Entry
EC1_15660 CDS
T02586
Name
(GenBank) Predicted hydrolase of the metallo-beta-lactamase superfamily
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
euc
Faecalitalea cylindroides
Pathway
euc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
euc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EC1_15660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
euc03019
]
EC1_15660
Messenger RNA biogenesis [BR:
euc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EC1_15660
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_C
RNase_J_b_CASP
Lactamase_B
Lactamase_B_2
RMMBL
ODP
UPF0180
DUF5333
Motif
Other DBs
NCBI-ProteinID:
CBK88904
UniProt:
D4JFD2
LinkDB
All DBs
Position
complement(1451211..1452911)
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AA seq
566 aa
AA seq
DB search
MKETKKDLSLTEKVRIFALGGLDEDGKNMLCIEVDDQIYIIEAGIKFPDAKESLGIEFII
QDFSYLLENKDRIVGVIITHGHDDVMGALPYLLKQIKVDVYTSPLTAKMIQKTLRKEKIT
GIKIHPIKRNDHKRIGKRKVIFFPVTHAYPGTFGVAISTTQGYIVYSGEFIEDYDALDDK
YRGDFSTITELGNEGVFILLQESKGAERTGHTSPNHRITPRLSQVLEQHDHSRIFISVYT
QSVYRIQEIIDCCIEYNRRMLFYTKELQELVSYLEELGYEVPKELIVDPKSLDNDMRDLV
VICSGQGKSLFKMISNIANNEVDEIDFDSDDVIVIASPVVPGVEQEFKSMENDIYKEEGK
IIVLDKNVLSMHPSKEDLKMMIFLMKPKYYIPVKGEYRLLHMNSEIALEMGYSPSKILIL
DNGQVATFENGKLKSCSMELELHDIMIDGKENWDMAGVVLKDREILSTDGVMILAIGLDA
FTKKIINGPDIQTRGLIYLRDAEYITSDVAQIMEKTIEEAVANKTYDNLTTRTEIRDKVS
KYLFKQTAKRPMVLPVILEINTSNLG
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaaacaaaaaaagatctttcactgacagagaaagttcgcatctttgccctgggg
ggcttggatgaagacgggaaaaatatgctctgtattgaagtagacgatcagatctacatc
atagaagctggaattaaatttccagatgctaaagaatcattaggtattgagtttatcatt
caggacttttcttatctattggaaaataaagaccgaatcgttggtgttatcataacgcat
ggtcatgatgatgtcatgggagccttaccatatttattaaagcagatcaaggtggatgtt
tatacatctccactaactgccaaaatgattcaaaagacattaagaaaagaaaaaataaca
ggaatcaagattcatccaattaagcgaaatgatcataaacgcattggaaaacgcaaagtc
atcttcttcccggtaacgcatgcgtatccaggtacatttggagttgcaatttcaaccaca
caaggatatatcgtttattctggtgagttcattgaagattatgatgcattggatgataag
tatcgtggtgatttcagtactattacagaattaggtaatgaaggcgtatttatcttgttg
caggaaagcaagggggcagaacggactggtcatacatcaccaaatcatagaattacccca
cggttgtctcaggttttagaacagcatgatcattcccgtatttttattagtgtatatacg
caaagtgtttatcgaattcaggaaatcattgattgttgtatcgaatacaatcgcaggatg
ttattctatacaaaagagttgcaggaattggtctcttatttagaagaacttggctatgag
gttccaaaagaattgatcgtagatccaaagagcttggataacgacatgcgagatcttgtt
gttatttgcagtggccagggtaaatcattgtttaaaatgatcagcaacattgccaataac
gaagtggatgaaattgattttgactcggatgatgtgatcgtgattgcttctccagtcgtt
ccaggtgtggaacaagaattcaaaagcatggaaaatgatatttataaagaagaaggtaag
atcatcgtgcttgataaaaatgtattgagcatgcacccatcaaaagaagatcttaagatg
atgatcttcttgatgaagccaaaatattatattcctgtcaaaggtgaatatcgtttgttg
catatgaattcagagattgcattggaaatgggatattctcctagcaagatcttaattctt
gataatggacaggttgcaacatttgaaaatggtaaattgaaatcttgttcgatggaacta
gaacttcacgatatcatgattgatggaaaagagaactgggatatggctggtgtcgtattg
aaggatcgtgaaatcttatctacagatggagttatgatcttagcaatcggacttgatgcc
tttacaaagaaaattataaatggcccagatattcaaactagagggttgatctatttacgt
gatgcggaatacatcaccagcgatgtagcgcagatcatggaaaaaacgattgaagaggcg
gttgccaataagacatatgataatttaacgactcgtacagagattcgtgataaagtcagc
aaatatttgtttaaacagaccgcaaagagaccgatggttttaccggttatcttagaaatc
aatacaagtaatttaggataa
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