Faecalitalea cylindroides: EC1_16100
Help
Entry
EC1_16100 CDS
T02586
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
euc
Faecalitalea cylindroides
Pathway
euc03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
euc00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EC1_16100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
euc03021
]
EC1_16100
03400 DNA repair and recombination proteins [BR:
euc03400
]
EC1_16100
Enzymes [BR:
euc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EC1_16100
Transcription machinery [BR:
euc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EC1_16100
DNA repair and recombination proteins [BR:
euc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EC1_16100
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
tRNA_NucTransf2
Motif
Other DBs
NCBI-ProteinID:
CBK88939
UniProt:
D4JFG7
LinkDB
All DBs
Position
complement(1492163..1496047)
Genome browser
AA seq
1294 aa
AA seq
DB search
MSINNFASIQVRLASPETILKWSHGEVTKPETINYRSQKAERDGLFCERIFGPTKDWECA
CGKYKKVRFKGVVCDRCGVEITKASVRRERMGHIHLAAPVAHIWYLRGIPSRMALLLDVT
PKQLEEVVYFVSYIVTDPKDTDLGYKQILSEREYRENMAIYGAGSFTAQTGAEAVLRLLQ
DVDLEQEYADVQEALEKAQGEKRKKLIKRLDTINAFRKSDNKPEWMILTNIPVIPPDLRP
MLQLDGGRFATSDLNDLYRRVITRNNRLRKLLELGTPNIIVQNEKRMLQEAVDALIDNGR
RSKPITGAGGRALKSLSHSLKGKQGRFRQNLLGKRVDFSGRSVIAVGPDLMMYQCGIPRE
MAINLFKPFIINEIVNQQLAANPKNAEKLIERRDPRIWDVVEKVIDGYPVLMNRAPTLHR
LGIQAFLPKLVEGRAMRLHPLVCTAFNADFDGDQMAIHVPLSEEARAEALVMMLGSHNIL
GPKDGKPIVTPGQDMVMGNFYLTMEETKQELLEESQHYMDADCPKEAAAWKRYALNEGHV
YSDVDEVMLAYQTGQVHLHSRIALPVKGMNKTSFNPVHENDYLITTVGKIIFNDMFPADF
PYLNEVSKENFEETPAKYFVKPGEDIKAYIEQLPIVNAVKKKDLGKVIAEVFKRYSVDET
AEILDQIKAKGFKYSTVAGITVSLSDIEVAPNKWEHVDEGREKADQLKRLQRKGMLTMEE
WERHLNKLWADVKDDIVGELMANLPRKNPINMMATSGARGNTSNFTQLAGMRGLMAKPGS
GKGRSGEYVPSIIEVPIYSCFREGLNVSEFFISTHGVRKGLTDTALKTAESGYLTRRLVD
VAQDVIVKEDDCGTDKGYWVETLMDRKTNTVIEPLMDRLVGRYSKQDVTDPNTGELIIAS
DEFITDEIAKRIVDAGIEGMYIRSAFTCKSRHGVCRKCYGRNMATGKDVEVGEAIGIMAA
QSIGEPGTQLTMRTFHTGGVAGGDGGDITQGLPRVEELFEARCPKGVAVIAQITGEITSI
ERIEGTMRQEVIVTNANESVSHKINANQTLRPWVQVGATIQAGVAMTEGPLDPKELLRVA
GVREVQDYILKEVKKVYQSQGIEISDKHIEVMIKQMLKKVIVVDSGDTDLNVGVQLSLNN
ITKINREALLSGKTPAQFKPVLLGISKASVETDSFLSAASFQETTKVLTDATIKGKVDNL
IGLKENVIIGKLIPAGTGCEGDRPQNAIVMAKAKELRDKRIARMHEVQDEEFDNIVNENL
TEELPKMDEEPSLDQDGIINDSDVLDNQSIEINE
NT seq
3885 nt
NT seq
+upstream
nt +downstream
nt
atgagtataaacaattttgcctcaattcaggttcgtttggcatcacctgaaacgatctta
aaatggtcacatggtgaagtaacaaagcctgaaacgatcaactatcgttctcaaaaagca
gaacgtgacggacttttctgtgagcgcattttcggccctacaaaggactgggaatgtgcc
tgcggtaaatataagaaggtgcgttttaaaggcgttgtctgcgatcgttgtggtgttgaa
atcacaaaagcgagcgtaagacgtgaacgtatgggtcatatccatttggctgctccagta
gctcacatctggtatctacgcggtattccaagtcgtatggctttattgttggatgtgaca
ccaaaacaacttgaagaagtagtatactttgtaagctatatcgtaaccgatcctaaggat
acagatctaggatataaacagatcttgtctgaaagagaatatcgtgaaaatatggctatc
tatggagcaggttcttttacagcacaaacaggtgctgaggctgtattgcgtctattacag
gatgtagatcttgaacaggaatatgcagatgttcaagaagctctagaaaaagctcaaggt
gaaaaacgtaaaaaattgattaaacgtcttgatacgatcaatgcgtttagaaaatcagat
aacaaacctgaatggatgatcctgacaaacattccggtaataccaccagatttaagacca
atgttacagttggatggtggacgttttgcgacaagtgatctaaatgatctatatcgtcgt
gtaatcactcgtaacaatcgtcttcgtaaattgttggaacttggtacaccaaatatcatc
gttcaaaacgaaaaacgtatgttacaggaagcagttgatgctttaatcgataatggacgc
cgttctaaaccaatcacaggagctggaggacgtgctctaaaatcactttcacattcattg
aaaggtaaacagggacgtttccgtcagaacttgttgggtaaacgtgttgacttctctgga
cgttctgttattgccgtaggaccagatttgatgatgtatcagtgtggtattcctcgtgaa
atggcaatcaacttgtttaaaccatttattattaatgaaatcgtaaatcaacaattggca
gccaatccaaaaaatgctgaaaagttgatcgaacgacgtgatcctagaatttgggatgtt
gttgaaaaagtaattgatggatatccagttttgatgaaccgtgctcctacgcttcaccgt
ttgggtattcaggccttccttcctaaacttgtagaaggacgtgctatgcgtctacatcca
cttgtttgtaccgcatttaatgctgacttcgacggtgaccagatggctattcacgttcct
ttgtctgaagaagcacgtgctgaggcattggtcatgatgctaggttctcataatatcctt
ggtccaaaagatggaaaaccaatcgttactccaggtcaggacatggttatggggaacttc
tatctaacaatggaagaaacgaaacaggaattgttggaagaatctcagcattatatggat
gcagattgtccaaaagaagctgcagcttggaaacgctatgcattaaatgaaggtcatgta
tattcagatgtagatgaagttatgcttgcatatcaaacagggcaggttcacttgcattca
cgtattgcattgcctgttaagggtatgaataaaacttcatttaatccagtgcatgaaaat
gattacttgatcacaactgtaggaaagatcatcttcaatgatatgttccctgcagacttc
ccgtatttgaacgaagtttcaaaagaaaactttgaagaaactccagctaaatacttcgta
aaacctggagaagatatcaaagcatatatcgagcagctaccaatcgtaaatgctgttaag
aaaaaagacttaggtaaagttattgctgaagtatttaaacgatactctgttgatgaaaca
gctgaaatccttgaccagatcaaggcaaaaggatttaagtattcaacagttgctggtatt
accgtttcactttctgatattgaagtggctcctaataaatgggaacatgtcgatgaaggt
cgtgaaaaagcggatcagttaaaacgtctacagcgtaaaggtatgttgacgatggaagag
tgggaacgtcatcttaataagctatgggcagatgtaaaagatgatatcgtaggtgagttg
atggctaacttacctagaaagaacccaatcaacatgatggctacttctggtgcccgtggt
aatacatctaactttacacagcttgccggaatgcgtggtttaatggctaaacctggtagt
ggtaagggtagaagcggtgaatatgttccttctatcatagaggttcctatttactcttgt
ttccgtgaaggtctaaacgtatctgagttctttatctctacacacggtgtgcgtaaaggt
ttgaccgatacagccttgaaaacagcggaatcaggttacttgactcgtcgtcttgttgac
gttgcacaggatgttatcgtaaaagaagatgactgtggaactgataaaggatactgggta
gaaacattgatggatcgtaagacaaacactgtcattgaaccattgatggatcgtttagtt
ggacgttattctaaacaagatgtaacagatccaaatacaggtgaacttattattgccagt
gatgaattcatcacggatgaaatcgcaaaacgcatcgtagatgctggaattgaaggtatg
tatatccgttctgcatttacttgcaagtcaagacatggtgtatgtcgcaaatgttatgga
cgtaacatggctacaggtaaagatgtagaagttggtgaagctattggtatcatggctgct
cagagtatcggtgagccaggtacacagttaacaatgcgtacattccataccggtggtgtt
gccggcggtgatggaggagacattacacagggtcttcctcgtgtcgaagagttatttgaa
gcacgttgtccaaaaggtgttgccgtaatcgcacagattacaggtgagatcacttcaatc
gaacgtattgaaggaacaatgcgtcaggaagttatcgtaacaaacgctaacgaaagcgtt
tctcataagatcaatgcaaaccagacacttcgtccatgggtacaggttggagcaacaatt
caggctggtgttgccatgacagaaggtccattggatccaaaagaattgttgcgtgtagct
ggtgttcgtgaagttcaggattatatcttgaaagaagttaaaaaggtttaccagtcacaa
ggtatcgaaatcagcgataagcacatcgaagttatgatcaaacagatgcttaagaaagtt
atcgttgtagacagcggagatacagatctaaatgttggtgttcagttatctttgaataac
atcactaagatcaaccgagaggctttactttctggaaagacacctgctcagttcaaacca
gtattgttaggtatttcaaaagccagtgttgagacagattcattcttatcagcagccagc
ttccaggaaactacaaaagtgttgacagatgctacgatcaaaggaaaagttgataatttg
attggtcttaaagaaaatgtcattatcggtaagttgattcctgccggaactggatgcgaa
ggcgaccgtcctcagaatgcaatcgttatggcaaaggcaaaagaactacgtgataaacgt
attgctcgtatgcatgaagttcaagacgaagagtttgataacatcgtcaatgaaaattta
acggaagaacttccaaaaatggatgaagaaccatctttagatcaagatggaatcatcaat
gacagtgatgttctagacaaccagtctattgaaatcaatgaataa
DBGET
integrated database retrieval system
