Faecalitalea cylindroides: EC1_18710
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Entry
EC1_18710 CDS
T02586
Name
(GenBank) Excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
euc
Faecalitalea cylindroides
Pathway
euc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
euc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EC1_18710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
euc03400
]
EC1_18710
DNA repair and recombination proteins [BR:
euc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EC1_18710
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
EC1_18710
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
AAA_25
AAA_22
AAA_7
P-loop_SecA
Cas3-like_C_2
AAA_19
AAA
Baculo_PEP_C
AAA_16
Motif
Other DBs
NCBI-ProteinID:
CBK89114
UniProt:
D4JFZ2
LinkDB
All DBs
Position
1735692..1737659
Genome browser
AA seq
655 aa
AA seq
DB search
MDKFELVSDYKPMGDQPTAIKELVQGLKDHKKYQVLLGATGTGKTFTVSNVIAQVNRPTL
VFAHNKTLAGQLYSEFKEFFPNNRVEYFVSYFDYYQPEAYLPKTDTYIDKNTKTNEELDM
LRMAAVNSVLERRDTIIVASVASIYGASNPEQYRHMIFTLRTGQTIDRNELMLALVHQQY
KRNDTDPLRGTFRVRGDVIEITPGHTDRYLIRIELFDDEIERICEVDPVTGHVNQAYHLY
IIYPANGYATSMDVIKRAAASIEEELEDRLDYFDKMGKPLEKERLEQRCRYDIEALKEFG
VCPGIENYSRHIDGRKPGERPYTLFDYFPDDFLLVVDESHVSLPQIRGMYNGDRARKEVL
VEYGFRLPSALDNRPLRFEEFESIIPSAIFVSATPGDYELEKVDGHVIEQIIRPTGLLDP
EVEVRPIEGQIDDLVDEIKMRIKKNQRTLITTLTVRMAEDLTSYLKNMDLKVAWLHHEVT
TIERTEIIHDLRQGKYDVLVGINLLREGLDIPEVSLIAILDADKEGFLRSKRSLIQIIGR
AARNAEGKVIMYADTITESMQYAIDETNRRRSIQIEYNKEHNIVPKTIIKPIHDVVRSKE
TKEMAAKYLKKKKVGAKQKEVMLKNIEQEMKEAARTLDFERAAQLRDILLELKAE
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggataaatttgaactggtatcagattataaaccaatgggcgatcagcctacggctatc
aaagaattggtgcaaggattaaaagatcataaaaaatatcaggttttgttgggggcaaca
ggaactggtaagacctttacagtctcaaatgtcattgctcaggtaaatcgtccaacattg
gtgtttgcacataataagacattagctgggcagctatactcggagtttaaagagtttttc
cctaataatagagtggagtactttgtctcctattttgattattatcaacctgaagcatat
ttgcctaagacggatacatatattgataaaaataccaagacaaatgaagaactggatatg
ttgaggatggccgcggtaaacagtgtgttagaaagacgtgatacgatcatcgttgccagt
gttgcctcaatttatggtgccagtaatccggaacaatatcgtcatatgatctttactttg
agaacagggcagaccatagatcgaaatgagttgatgctggcattggttcatcaacagtat
aaaagaaatgataccgatcctttgcgtggaacttttagagttcgaggcgatgttattgaa
attactcctggtcatacagatcgttacctgattcgtattgaattgtttgatgatgaaatt
gaacgaatttgtgaagtggatcctgttacaggtcatgtaaatcaggcatatcatttatat
attatttatccggcaaatggatatgcgacaagcatggatgttattaaaagggcagctgca
agcattgaagaagagttggaagatcgtttagattactttgacaaaatgggaaaaccgctt
gaaaaagaacgtttggaacaaagatgtcgttatgatatagaagctttaaaagaatttggg
gtgtgtccaggaattgaaaactattcacgacacattgatggacgaaagccaggggaaaga
ccctacacattgtttgattattttccagatgattttttattggtcgtggatgaaagtcat
gtttctcttccgcagattcgaggcatgtataatggagacagggcacgtaaagaagtgtta
gtagagtatggttttcgtttaccaagtgccttagataatcgtccactgcgttttgaagaa
ttcgaatcgatcataccttcggctatatttgtttcggcaactccgggtgattatgaactt
gagaaagtagatggtcatgttattgaacagatcattcgtccaaccggattattggatcca
gaagtggaagtaagaccaatcgaaggtcagattgatgatctagtagatgaaattaaaatg
cgtattaaaaagaatcaaagaacattgatcaccaccttgactgtgcgtatggcagaagat
cttacatcatatcttaagaatatggatcttaaagttgcctggcttcatcatgaagtaacg
acaattgaaagaacagagatcattcatgatcttaggcagggaaaatatgatgtattggta
ggaatcaacttattaagagaaggtctggatataccggaagtttctttaattgcgatctta
gatgcagacaaagaaggctttttaagaagtaaacgttctttaattcagatcattggacgt
gccgctagaaatgcagaaggaaaagtcattatgtatgcagatacgatcaccgaaagtatg
caatatgctattgatgaaacaaatcgaagaagaagcatacagatcgaatataataaggaa
cataatattgttccaaaaacgatcataaaaccaattcacgatgtagttcgatcaaaggaa
acgaaagaaatggctgccaagtacctaaagaaaaagaaggtgggcgcaaaacaaaaagaa
gtcatgttaaagaatatcgaacaggaaatgaaagaggctgcgcgtacgcttgattttgaa
agagcagctcagttgcgcgatatattattagaattaaaagcagaataa
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