Escherichia coli O17 K52 H18 UMN026 (ExPEC): ECUMN_1088
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Entry
ECUMN_1088 CDS
T00831
Symbol
serS
Name
(GenBank) seryl-tRNA synthetase, also charges selenocysteinyl-tRNA with serine
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
eum
Escherichia coli O17:K52:H18 UMN026 (ExPEC)
Pathway
eum00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
eum00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ECUMN_1088 (serS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
eum01007
]
ECUMN_1088 (serS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eum03016
]
ECUMN_1088 (serS)
Enzymes [BR:
eum01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
ECUMN_1088 (serS)
Amino acid related enzymes [BR:
eum01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
ECUMN_1088 (serS)
Transfer RNA biogenesis [BR:
eum03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
ECUMN_1088 (serS)
Prokaryotic type
ECUMN_1088 (serS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
Filament
CCDC160
Astrin_C
CENP-F_leu_zip
CCDC39
Centrobin_CC
UPF0242
LEKR1
Motif
Other DBs
NCBI-ProteinID:
CAR12297
UniProt:
B7NAP4
LinkDB
All DBs
Position
1128669..1129961
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AA seq
430 aa
AA seq
DB search
MLDPNLLRNEPDAVAEKLARRGFKLDVDKLGALEERRKVLQVKTENLQAERNSRSKSIGQ
AKARGEDIEPLRLEVNKLGEELDAAKAELDALQAEIRDIALTIPNLPADEVPVGKDENDN
VEVSRWGTPREFDFEVRDHVTLGEMHSGLDFAAAVKLTGSRFVVMKGQIARMHRALSQFM
LDLHTEQHGYSENYVPYLVNQDTLYGTGQLPKFAGDLFHTRPLEEEADTSNYALIPTAEV
PLTNLVRGEIIDEDDLPIKMTAHTPCFRSEAGSYGRDTRGLIRMHQFDKVEMVQIVRPED
SMAALEEMTGHAEKVLQLLGLPYRKIILCTGDMGFGACKTYDLEVWIPAQNTYREISSCS
NVWDFQARRMQARCRSKSDKKTRLVHTLNGSGLAVGRTLVAVMENYQQADGRIEVPEVLR
PYMNGLEYIG
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
atgctcgatcccaatctgctgcgtaatgagccagacgcagtcgctgaaaaactggcacgc
cggggctttaagctggatgtagataagctgggcgctcttgaagagcgtcgtaaagtattg
caggtcaaaacggaaaacctgcaagcggagcgtaactcccgatcgaaatccattggccag
gcgaaagcgcgcggggaagatatcgagcctttacgtctggaagtgaacaaactgggcgaa
gagctggatgcagcaaaagccgagctggatgctttacaggctgaaattcgcgatatcgcg
ctaaccatccctaacctgcctgcagatgaagtgccagtaggtaaagacgaaaatgacaac
gttgaagtcagccgctggggcaccccgcgtgagtttgactttgaagttcgtgaccatgtg
acgctgggtgaaatgcactctggcctcgactttgcagccgcagttaagttgaccggttcc
cgctttgtggtaatgaaagggcagattgctcgcatgcaccgcgcactgtcgcagtttatg
ctggatctgcataccgaacagcatggctacagtgagaactatgttccgtacctggttaac
caggacacgctgtacggtacgggtcagctgccgaaatttgctggcgatctgttccatact
cgtccgctggaagaagaagcagacaccagtaactatgcgctgatcccaacggcagaagtt
ccgctgaccaacctggtgcgcggtgaaatcatcgatgaagatgatctgccaattaagatg
accgcccacaccccatgcttccgttctgaagccggttcatatggtcgtgacacccgtggt
ctgatccgtatgcaccagttcgacaaagttgaaatggtgcagatcgtgcgaccggaagac
tcaatggcggcgctggaagagatgactggtcatgcagaaaaagtcctgcagttgctgggc
ctgccgtaccgtaaaatcatcctttgcactggcgacatgggttttggtgcttgcaaaact
tacgacctggaagtatggatcccggcacagaacacctaccgcgagatctcttcctgctcc
aacgtctgggatttccaggcgcgtcgtatgcaggcacgttgccgtagcaagtcggacaag
aaaacccgtctggttcataccctgaacggttctggtctggctgttggtcgtacgctggtt
gcggttatggaaaactatcagcaggctgatggtcgtattgaagtaccagaagttctgcgt
ccgtatatgaacggactggaatatattggctaa
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