Escherichia coli O17 K52 H18 UMN026 (ExPEC): ECUMN_1119
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Entry
ECUMN_1119 CDS
T00831
Symbol
ycbB
Name
(GenBank) putative exported enzyme
KO
K21470
L,D-transpeptidase YcbB
Organism
eum
Escherichia coli O17:K52:H18 UMN026 (ExPEC)
Brite
KEGG Orthology (KO) [BR:
eum00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
eum01002
]
ECUMN_1119 (ycbB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
eum01011
]
ECUMN_1119 (ycbB)
Peptidases and inhibitors [BR:
eum01002
]
Cysteine peptidases
Family C82
ECUMN_1119 (ycbB)
Peptidoglycan biosynthesis and degradation proteins [BR:
eum01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
ECUMN_1119 (ycbB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
DUF4389
Motif
Other DBs
NCBI-ProteinID:
CAR12328
UniProt:
B7N392
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All DBs
Position
1168819..1170666
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AA seq
615 aa
AA seq
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MLLNMMCGRRLSAISLCLAVTFAPLFNAQADEPEVIPGDSPVAVSEQGEALPQAQATAIM
AGIQPLPEGAAEKARTQIESQLPAGYKPVYLNQLQLLYAARDMQPMWENRDAVKAFQQQL
AEVAIAGFQPQFNKWVELLTDPGVNGMARDVVLSDAMMGYLHFIANIPVKGTRWLYSSKP
YALATPPLSVINQWQLALDKGQLPTFVAGLAPQHPQYAAMHESLLALLSDTKPWPQLTGK
ATLRPGQWSNDVAALREILQRTGMLDGGPKITLPGDDTPTDTVVSPSAVTVETAETKPMD
KQTTSRSKPAPAVRAAYDNELVEAVKRFQAWQGLGADGAIGPATRDWLNVTPAQRAGVLA
LNIQRLRLLPTELSTGIMVNIPAYSLVYYQNGNQVLDSRVIVGRPDRKTPMMSSALNNVV
VNPPWNVPPTLARKDILPKVRNDPGYLESHGYTVMRGWNSREAIDPWQVDWSTITASNLP
FRFQQAPGPRNSLGRYKFNMPSSEAIYLHDTPNHNLFKRDTRALSSGCVRVNKASDLANM
LLQDAGWNDKRISDALKQGDTRYVNIRQSIPVNLYYLTAFVGADGRTQYRTDIYNYDLPA
RSSSQIVSKAEQLIR
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgttgcttaatatgatgtgtggtcgtcggctgtcggcaatcagtttgtgcctggccgta
acattcgctccactgttcaatgcgcaggccgatgagcctgaagtaatccctggcgacagc
ccggtggctgtcagtgaacagggcgaggcactgccgcaggcgcaagccacggcaataatg
gcggggatccagccattgcctgaaggtgcggcagaaaaagcccgcacgcaaatcgaatct
caattacccgcaggttacaagccggtttatcttaaccagcttcaactgttgtatgccgca
cgcgatatgcaacccatgtgggaaaaccgtgatgctgttaaagccttccagcaacagctg
gcagaggtggcgattgccggtttccagccgcagtttaataaatgggtagagttactgacc
gatcctggtgttaacgggatggcacgcgacgtcgtgctctctgatgcgatgatgggctat
ctccatttcattgcaaatattccggtcaaaggcactcgctggctatatagcagtaaacct
tatgcgcttgcaacgccgccgctttcggtgattaaccaatggcagctggcgctggataaa
ggtcaattgccgacgtttgttgcaggactggcaccgcagcatccgcaatatgcggcgatg
catgaatcgttactggccttactcagtgacaccaaaccgtggcctcaactgaccggtaaa
gcaacgttgcgcccagggcagtggagtaacgacgtagcggcgttgcgcgaaatattgcaa
cgcacaggcatgttggacggggggccgaaaattactctacctggcgatgacacgccaact
gacacggtagtcagcccatccgctgttactgttgaaacagcagaaactaagccgatggac
aagcaaacgacgtctcgtagtaaacctgcgcctgccgttcgtgccgcctacgataatgaa
ctggtggaagccgttaaacgttttcaggcatggcaaggattgggagcagatggcgctatt
ggcccggcaacgcgtgactggttaaacgtaacgcccgcccagcgtgctggcgtgttggca
ctcaacatccagcgattgcgcttgctgccaacagagctttctaccgggatcatggttaac
attccagcctattcgctggtctactatcagaacggcaatcaggtactggattcgcgagtc
attgtcggtcgccccgatcgcaaaacgccgatgatgagcagtgcacttaacaacgtagtg
gtaaacccgccgtggaacgtaccaccaactctggcacgcaaagatattctgccgaaagtg
cgcaacgatccgggatacctcgaaagccatggctatacggtgatgcgcggctggaacagc
agagaagcgattgacccatggcaggttgactggtctacaatcacggcctcgaatttaccg
ttccgcttccagcaggctccaggcccacggaactcgctggggcgctataaattcaatatg
ccgagttcagaggccatttatttgcatgacacgccgaaccacaatctgttcaagcgtgat
acacgcgcattgagctcaggctgtgtacgagtgaataaagcttccgatctggcgaatatg
ctgttgcaggatgcaggatggaatgacaaacgtatttctgatgcgctgaagcaaggcgat
acgcgttacgtcaatattcggcagtcgattccggtgaatctctactacctgacggccttt
gttggtgcagatggtcgtacccagtatcgtacagatatttacaattatgatctacctgcg
cgatccagctcgcaaatcgtatcgaaagcggaacaattaatcaggtaa
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