Escherichia coli O17 K52 H18 UMN026 (ExPEC): ECUMN_1379
Help
Entry
ECUMN_1379 CDS
T00831
Symbol
ymfC
Name
(GenBank) 23S rRNA pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
eum
Escherichia coli O17:K52:H18 UMN026 (ExPEC)
Brite
KEGG Orthology (KO) [BR:
eum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eum03009
]
ECUMN_1379 (ymfC)
Enzymes [BR:
eum01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
ECUMN_1379 (ymfC)
Ribosome biogenesis [BR:
eum03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ECUMN_1379 (ymfC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
CAR12588
UniProt:
B7N3P5
LinkDB
All DBs
Position
complement(1409063..1409716)
Genome browser
AA seq
217 aa
AA seq
DB search
MRQFIISENTMQKTSFRNHQVKRFSSQRSTRRKLENQPTRVILFNKPYDVLPQFTDEAGR
KTLKEFIPVQGVYAAGRLDRDSEGLLVLTNNGALQARLTQPGKRTGKIYYVQVEGIPTQD
ALEALRNGVTLNDGPTLPAGVELVDEPAWLWPRNPPIRERKSIPTSWLKITLYEGRNRQV
RRMTAHVGFPTLRLIRYAMGDYSLDNLANGEWREATD
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgcggcaattcataatctctgaaaataccatgcaaaaaacttcttttagaaatcaccag
gttaagcgattcagctcgcaacgttctaccaggcgtaaacttgaaaaccagcccacgcgc
gtgatcctgttcaataaaccctacgatgttcttccgcagttcaccgatgaagccggacgc
aaaacattaaaagaattcatcccggttcagggcgtttatgcagcaggtcgtcttgaccgc
gatagcgaagggttactggtgctgaccaataacggcgcgttgcaggcgcgtttaacccag
ccgggtaaacgcaccggaaaaatctattatgtgcaggtggaaggtattcccacacaagac
gcacttgaagccttgcgcaatggcgtaaccttaaatgatggccctaccctgcccgcaggc
gtagagctggttgacgaacccgcgtggttatggccgcggaatccaccaattcgtgaacgc
aaaagtattcccaccagctggctgaagatcaccttatatgaaggacgtaatcgccaggtg
cgccgcatgaccgcccatgttggtttccccacgctgcgactgattcgctatgcgatgggt
gattactctttggataatcttgccaacggcgaatggcgagaagcgacagattaa
DBGET
integrated database retrieval system
