Escherichia coli O17 K52 H18 UMN026 (ExPEC): ECUMN_3069
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Entry
ECUMN_3069 CDS
T00831
Symbol
truD
Name
(GenBank) pseudoruidine synthase
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
eum
Escherichia coli O17:K52:H18 UMN026 (ExPEC)
Brite
KEGG Orthology (KO) [BR:
eum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eum03016
]
ECUMN_3069 (truD)
Enzymes [BR:
eum01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
ECUMN_3069 (truD)
Transfer RNA biogenesis [BR:
eum03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ECUMN_3069 (truD)
Prokaryotic type
ECUMN_3069 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
CAR14236
UniProt:
B7N6X5
LinkDB
All DBs
Position
complement(3174088..3175137)
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AA seq
349 aa
AA seq
DB search
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVAD
ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYVRHKRK
LRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGALRWAQ
TNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEE
LAELQRRVNDKELMITAALPGSGEWGTQREALAFEQAAVAAETELQALLVREKVEAARRA
MLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtttgataatctcacttacctccacggtaaaccgcaaggcaccgggttgctg
aaagccaatccggaagactttgtggtggtggaagatttgggctttgagcctgatggtgaa
ggtgagcatattctggttagaatcctcaaaaacggctgcaatacccgttttgtggcggat
gcactggcgaaattcctgaaaattcatgcccgtgaagtcagcttcgctgggcaaaaagac
aaacatgctgtaacggaacagtggttatgtgctcgcgtgccgggcaaggaaatgcccgat
ctgagcgcctttcaactggaaggctgccaggtgctggagtatgtgcggcacaagcgcaag
ctgcgtttaggggcgctgaaaggtaacgcctttaccctggttctgcgcgaagtgagcaat
cgcgatgacgttgaacaacgtctgatcgatatttgcgtaaaaggtgtaccgaactacttc
ggtgcccaacgtttcgggattggcggtagcaacttgcagggcgcgctgcgctgggcgcaa
accaatactccggtgcgcgatcgcaataaacggagtttttggttgtcggcagcccgcagt
gcgttgtttaatcagattgttgctgagcgcctcaaaaaagcagacgttaatcaagttgtt
gacggcgatgcgctacaattagccggacgtggtagctggtttgtcgcaaccaccgaagaa
ctggcggaattacagcgtcgcgtcaacgataaagagctgatgataaccgccgcattgccg
ggcagtggcgaatggggaactcagcgtgaagcgttggcattcgaacaagcagctgtcgcc
gcagaaactgaattacaagccttactggtgcgcgaaaaagttgaagccgcgcgcagagcg
atgctgctgtatccgcaacaattaagctggaactggtgggatgacgtcaccgtagaaatc
cgtttctggcttccggcgggtagttttgcaaccagcgttgtcagggaacttatcaacaca
acaggtgattatgcgcatattgctgagtaa
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