Escherichia coli O17 K52 H18 UMN026 (ExPEC): ECUMN_3644
Help
Entry
ECUMN_3644 CDS
T00831
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
eum
Escherichia coli O17:K52:H18 UMN026 (ExPEC)
Pathway
eum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECUMN_3644 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eum03019
]
ECUMN_3644 (deaD)
03009 Ribosome biogenesis [BR:
eum03009
]
ECUMN_3644 (deaD)
Enzymes [BR:
eum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ECUMN_3644 (deaD)
Messenger RNA biogenesis [BR:
eum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ECUMN_3644 (deaD)
Ribosome biogenesis [BR:
eum03009
]
Prokaryotic type
rRNA helicases
ECUMN_3644 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_C
ResIII
CMS1
AAA_22
Cas3-like_C_2
DRTGG
Motif
Other DBs
NCBI-ProteinID:
CAR14798
UniProt:
B7NDE8
LinkDB
All DBs
Position
complement(3759166..3761133)
Genome browser
AA seq
655 aa
AA seq
DB search
MLINFMMSYVDWPPLILRHTYYMAEFETTFADLGLKAPILEALNDLGYEKPSPIQAECIP
HLLNGRDVLGMAQTGSGKTAAFSLPLLQNLDPELKAPQILVLAPTRELAVQVAEAMTDFS
KHMRGVNVVALYGGQRYDVQLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEA
DEMLRMGFIEDVETIMAQIPEGHQTALFSATMPEAIRRITRRFMKEPQEVRIQSSVTTRP
DISQSYWTVWGMRKNEALVRFLEAEDFDAAIIFVRTKNATLEVAEALERNGYNSAALNGD
MNQALREQTLERLKDGRLDILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGR
AGRAGRALLFVENRERRLLRNIERTMKLTIPEVELPNAELLGKRRLEKFAAKVQQQLESS
DLDQYRALLSKIQPTAEGEELDLETLAAALLKMAQGERTLIVPPDAPMRPKREFRDRDDR
GPRDRNDRGPRGDREDRPRRERRDVGDMQLYRIEVGRDDGVEVRHIVGAIANEGDISSRY
IGNIKLFASHSTIELPKGMPGEVLQHFTRTRILNKPMNMQLLGDAQPHTGGERRGGGRGF
GGERREGGREGGRNFSGERREGGRGDGRRFSGERREGRAPRRDDSTGRRRFGGDA
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
ttgctgatcaatttcatgatgagttatgtagactggccgccattaattttgaggcacacg
tactacatggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatcctt
gaagcccttaacgatctgggttacgaaaaaccatctccaattcaggcagagtgtattcca
catctgctgaatggccgcgacgtcctgggtatggcccagacggggagcggaaaaactgca
gcattctctttacctctgctgcagaatcttgatcctgagctgaaagcaccacagattctg
gtgttggcaccgacccgcgaactggcggtacaggttgctgaggcaatgacggatttctct
aaacacatgcgcggcgtaaacgtggttgccctgtacggcggccagcgttatgacgtgcaa
ttacgcgccctgcgtcaggggccgcagatcgttgtcggtactccgggccgtctgctggat
cacctgaaacgtggcactctggacctttctaaactgagcggtctggttctggatgaagct
gacgaaatgctgcgcatgggcttcatcgaagacgttgaaactattatggcgcagatcccg
gaaggtcatcagaccgctctgttctctgcaaccatgccggaagcgattcgtcgtattacc
cgccgctttatgaaagagccgcaggaagtgcgcattcagtccagcgtgactacccgtcct
gacatcagccagagctactggactgtctggggtatgcgtaaaaacgaagcactggtacgt
ttcctggaagcggaagattttgatgcggcgattatcttcgttcgtaccaaaaacgcgact
ctggaagtggcagaagctcttgagcgtaacggctacaatagcgccgcgctgaacggtgac
atgaaccaggcgctgcgtgagcagacactggaacgactgaaagatggtcgtctggacatc
ctgattgcgaccgacgttgcggcccgtggcctggacgttgagcgtatcagcctggtagtt
aactacgatatcccgatggattctgagtcttacgttcaccgtatcggtcgtaccggtcgt
gcgggtcgtgctggtcgtgcgctcctgttcgttgagaatcgtgagcgtcgtctgctgcgt
aacattgaacgcaccatgaagctgaccattccggaagttgaactgccgaacgcagaactg
ctgggcaaacgtcgtctggaaaaattcgccgctaaagtacagcagcagctggaaagcagc
gatctggatcaataccgtgcactgctgagcaaaattcagccgactgccgaaggcgaagag
ctggatctcgaaactctggccgccgcactgctgaaaatggcacagggtgaacgtactctg
attgttccgccagatgcgccgatgcgtccgaaacgtgaattccgtgaccgtgatgaccgt
ggtccgcgcgatcgtaacgaccgtggcccgcgtggtgaccgtgaagatcgtccgcgtcgt
gaacgtcgtgatgttggcgatatgcagctgtaccgcattgaagtgggccgcgatgatggt
gttgaagttcgtcatatcgttggcgcgattgctaacgaaggcgacatcagcagccgttac
atcggtaacatcaagctgtttgcttctcactccaccatcgaactgccgaaaggtatgccg
ggtgaagtgctgcaacactttacgcgtactcgcattctcaacaagccgatgaacatgcag
ttactgggcgatgcacagccgcatactggcggtgagcgtcgtggcggtggtcgtggtttc
ggtggcgaacgtcgtgaaggtggtcgtgaaggcggtcgtaacttcagcggtgaacgccgt
gaaggtggtcgtggtgatggtcgtcgttttagcggcgaacgtcgtgaaggccgcgctccg
cgtcgtgatgactctaccggtcgtcgtcgtttcggtggtgatgcgtaa
DBGET
integrated database retrieval system
