Escherichia coli O17 K52 H18 UMN026 (ExPEC): ECUMN_3646
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Entry
ECUMN_3646 CDS
T00831
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
eum
Escherichia coli O17:K52:H18 UMN026 (ExPEC)
Pathway
eum03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eum00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ECUMN_3646 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eum03019
]
ECUMN_3646 (pnp)
03016 Transfer RNA biogenesis [BR:
eum03016
]
ECUMN_3646 (pnp)
Enzymes [BR:
eum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ECUMN_3646 (pnp)
Messenger RNA biogenesis [BR:
eum03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ECUMN_3646 (pnp)
Transfer RNA biogenesis [BR:
eum03016
]
Prokaryotic type
tRNA degradation factors
ECUMN_3646 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_2
KH_2
OB_RRP5_4th
aRib
S1_RRP5
KH-I_KHDC4-BBP
KH_SLS1_2
Motif
Other DBs
NCBI-ProteinID:
CAR14800
UniProt:
B7NDF0
LinkDB
All DBs
Position
complement(3762240..3764444)
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AA seq
734 aa
AA seq
DB search
MRRRSGINTSAVRYCLRKRKDITLLNPIVRKFQYGQHTVTLETGMMARQATAAVMVSMDD
TAVFVTVVGQKKAKPGQDFFPLTVNYQERTYAAGRIPGSFFRREGRPSEGETLIARLIDR
PIRPLFPEGFVNEVQVIATVVSVNPQVNPDIVAMIGASAALSLSGIPFNGPIGAARVGYI
NDQYVLNPTQDELKESKLDLVVAGTEAAVLMVESEAELLSEDQMLGAVVFGHEQQQVVIQ
NINELVKEAGKPRWDWQPEPVNEALNARVAALAEARLSDAYRITDKQERYAQVDVIKSET
IATLLAEDETLDENELGEILHAIEKNVVRSRVLAGEPRIDGREKDMIRGLDVRTGVLPRT
HGSALFTRGETQALVTATLGTARDAQVLDELMGERTDTFLFHYNFPPYSVGETGMVGSPK
RREIGHGRLAKRGVLAVMPDMDKFPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPI
KAAVAGIAMGLVKEGDNYVVLSDILGDEDHLGDMDFKVAGSRDGISALQMDIKIEGITKE
IMQVALNQAKGARLHILGVMEQAINAPRGDISEFAPRIHTIKINPDKIKDVIGKGGSVIR
ALTEETGTTIEIEDDGTVKIAATDGEKAKHAIRRIEEITAEIEVGRVYNGKVTRIVDFGA
FVAIGGGKEGLVHISQIADKRVEKVTDYLQMGQEVPVKVLEVDRQGRIRLSIKEATEQSQ
PAAAPEAPAAEQGE
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagaagatcgggtattaacaccagtgccgtaaggtactgtctaagaaagagaaag
gatattacattgcttaatccgatcgttcgtaaattccagtacggccaacacaccgtgact
ctggaaaccggcatgatggctcgtcaggctactgccgctgttatggttagcatggatgac
accgcggtattcgttaccgttgttggccagaaaaaagccaaaccaggtcaggacttcttc
ccactgaccgttaactatcaggagcgtacctacgctgctggtcgtatcccgggtagcttc
ttccgtcgtgaaggtcgtccaagcgaaggcgaaaccctgatcgcgcgtctgattgaccgc
ccgattcgcccgctgttcccggaaggcttcgtcaacgaagttcaggttatcgccaccgtg
gtttctgttaacccgcaggttaacccggatatcgtcgcgatgattggcgcttccgcagca
ctgtctctgtctggtattccgttcaatggtccgattggtgctgcccgcgtaggttacatc
aatgaccagtacgtactgaacccgactcaggacgagctgaaagagagcaaactggatctg
gttgttgccggtactgaagccgctgtactgatggttgaatctgaagctgaactgctgagc
gaagaccagatgttgggcgcagtagtgttcggtcatgaacaacagcaggttgtcattcag
aacatcaatgaactggtgaaagaagccggtaaaccgcgttgggactggcagccggagccg
gtaaacgaagcgctgaacgcgcgcgttgctgcactggctgaagctcgtctgagcgatgct
taccgcatcaccgacaaacaagagcgttatgcgcaggttgatgtcatcaaatctgaaacc
atcgcgacgctgcttgctgaagatgaaaccctggacgaaaacgaactgggtgaaattctg
cacgctatcgagaaaaacgttgttcgtagccgcgtactggcaggcgaaccgcgtattgac
ggtcgtgaaaaagatatgattcgtggtctggatgtgcgtactggcgtgctgccgcgtact
cacggttctgcgctgttcacccgtggtgaaactcaggcgctggttaccgcaacgctgggt
actgcacgtgacgcgcaagttcttgatgaactaatgggcgaacgtactgacaccttcctg
ttccactacaacttccctccgtactcagtaggcgaaaccggcatggtcggttctccgaag
cgtcgtgaaattggtcacggtcgtctggcgaagcgcggtgtgctggcagtcatgccggat
atggacaaattcccgtacaccgtacgtgttgtgtctgaaatcactgaatccaacggttcc
tcttctatggcttccgtgtgcggcgcgtctctggcgctgatggacgcaggtgtgccaatc
aaagctgctgttgcgggtatcgcaatgggtctggtgaaagaaggcgacaactacgttgta
ctgtctgacattttgggcgacgaagatcacctgggcgatatggacttcaaagttgcgggt
tcccgcgacggtatctctgcattgcagatggatatcaaaattgaaggtatcaccaaagag
atcatgcaggttgcgctgaaccaggctaaaggtgcgcgtctgcatatcctgggcgtaatg
gaacaggcgatcaacgcgccgcgtggcgatatctctgagttcgctccgcgtatccatacc
atcaagatcaacccggacaagatcaaagacgttatcggtaaaggcggttctgtaatccgt
gctctgaccgaagaaactggcaccaccatcgaaatcgaagatgacggtactgtgaaaatc
gcagcgaccgacggcgagaaagcgaaacatgctattcgtcgtatcgaagagatcactgca
gaaatcgaagtgggccgcgtctacaatggtaaagtgacccgtatcgttgactttggcgca
tttgttgccatcggcggcggtaaagaaggtctggtacacatctctcagatcgctgacaaa
cgcgttgagaaagtgaccgattacctgcagatgggtcaggaagtaccggtgaaagttctg
gaagttgatcgccagggccgtatccgtctgagcattaaagaagcgactgagcagtctcaa
cctgctgcagcaccggaagctccggctgctgaacagggcgagtaa
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