Escherichia coli O17 K52 H18 UMN026 (ExPEC): ECUMN_3756
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Entry
ECUMN_3756 CDS
T00831
Symbol
yrdC
Name
(GenBank) putative ribosome maturation factor
KO
K07566
L-threonylcarbamoyladenylate synthase [EC:
2.7.7.87
]
Organism
eum
Escherichia coli O17:K52:H18 UMN026 (ExPEC)
Brite
KEGG Orthology (KO) [BR:
eum00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eum03009
]
ECUMN_3756 (yrdC)
03016 Transfer RNA biogenesis [BR:
eum03016
]
ECUMN_3756 (yrdC)
Enzymes [BR:
eum01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.87 L-threonylcarbamoyladenylate synthase
ECUMN_3756 (yrdC)
Ribosome biogenesis [BR:
eum03009
]
Prokaryotic type
Other maturation factors
ECUMN_3756 (yrdC)
Transfer RNA biogenesis [BR:
eum03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
ECUMN_3756 (yrdC)
Prokaryotic type
ECUMN_3756 (yrdC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sua5_yciO_yrdC
Motif
Other DBs
NCBI-ProteinID:
CAR14904
UniProt:
B7NDQ4
LinkDB
All DBs
Position
complement(3877102..3877674)
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AA seq
190 aa
AA seq
DB search
MNNNLQGDAIAAAIDVLNEERVIAYPTEAVFGVGCDPDSEIAVMRLLELKQRPVDKGLIL
IAANYEQLKPYIDDTMLTDAQRETIFSRWPGPVTFVFPAPATTPRWLTGRFDSLAVRVTD
HPLVVALCQAYGKPLVSTSANLSGLPPCRTVDEVRAQFGAAFPVVPGETGGRLNPSEIRD
ALTGELFRQG
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
gtgaataataacctgcaaggagacgctatcgcagctgcgatagatgttctcaatgaagaa
cgtgtcatcgcctatccaacggaagccgttttcggtgttgggtgtgatcctgatagcgaa
atagcagtgatgagactgttggagttaaaacagcgtccggttgataaggggctgatttta
atcgcagcaaattacgagcagcttaaaccctatattgatgacaccatgctgactgatgcg
cagcgtgaaaccattttttcccgctggccaggtcctgtcacctttgtctttcccgcgcct
gcgacaacaccgcgctggttgacgggccgctttgattcgcttgctgtacgagtcaccgac
catccgttggtggttgctttgtgccaggcttatggtaaaccgctggtttctaccagtgcc
aacttgagtggattgccaccttgtcgaacagtagacgaagttcgcgcacaatttggcgcg
gcgttcccggttgtgcctggtgaaacgggggggcgtttaaatccttcagaaatccgcgat
gccctgacgggtgaactgtttcgacaggggtaa
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