Escherichia coli O17 K52 H18 UMN026 (ExPEC): ECUMN_4338
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Entry
ECUMN_4338 CDS
T00831
Symbol
uvrD
Name
(GenBank) DNA-dependent ATPase I and helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
eum
Escherichia coli O17:K52:H18 UMN026 (ExPEC)
Pathway
eum03420
Nucleotide excision repair
eum03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
eum00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ECUMN_4338 (uvrD)
03430 Mismatch repair
ECUMN_4338 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eum03400
]
ECUMN_4338 (uvrD)
Enzymes [BR:
eum01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ECUMN_4338 (uvrD)
DNA repair and recombination proteins [BR:
eum03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ECUMN_4338 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
ECUMN_4338 (uvrD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Motif
Other DBs
NCBI-ProteinID:
CAR15471
LinkDB
All DBs
Position
4483951..4486113
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AA seq
720 aa
AA seq
DB search
MDVSYLLDSLNDKQREAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAV
TFTNKAAAEMRHRIGQLMGTSQGGMWVGTFHGLAHRLLRAHHMDANLPQDFQILDSEDQL
RLLKRLIKAMNLDEKQWPPRQAMWYINSQKDEGLRPHHIQSYGNPVEQTWQKVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPYILQHYRERFTNILVDEFQDTNNIQYAWIRLLAGDT
GKVMIVGDDDQSIYGWRGAQVENIQRFLNDFPGAETIRLEQNYRSTSNILSAANALIENN
NGRLGKKLWTDGADGEPISLYCAFNELDEARFVVNRIKTWQDKGGALAECAILYRSNAQS
RVLEEALLQASMPYRIYGGMRFFERQEIKDALSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTSRDRQLTLWQACRELLQEKALAGRAASALQRFMELIDALAQETADMPLHVQ
TDRVIKDSGLRTMYEQEKGEKGQTRIENLEELVTATRQFSYNEEDEDLMPLQAFLSHAAL
EAGEGQADTWQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLTYAETRRLYGKEVYHRPSRFIGELPEECVEEVRLRATVSRPVSHQRMG
TPMVENDSGYKLGQRVRHAKFGEGTIVNMEGSGEHSRLQVAFQGQGIKWLVAAYARLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttcttacctgctcgacagccttaatgacaaacagcgcgaagcggtggccgcg
ccacgcagcaaccttctggtgctggcgggcgcgggcagtggtaagacgcgcgtactggtg
catcgtatcgcctggctgatgagcgtggaaaactgctcgccatattcgattatggcggta
acgtttaccaacaaagcggcggcggagatgcgtcatcgtatcgggcagctgatgggcacc
agccagggcggcatgtgggtcggcaccttccacgggctggcgcaccgtctgctgcgtgcg
caccatatggacgccaatctgccgcaggattttcagatcctcgacagcgaggaccagcta
cgcctgctcaaacgcctaatcaaggcgatgaacctcgacgagaagcagtggccgccgcgc
caggcaatgtggtacatcaacagccagaaagatgaaggcctgcgtccacatcatattcaa
agctacggtaatccggtggagcagacctggcagaaggtgtatcaggcgtatcaggaagcg
tgtgaccgcgcgggcctggtggacttcgccgagctgctgctacgtgctcacgagttgtgg
cttaacaagccgtatatccttcagcactatcgcgaacggtttaccaatatcctggtggac
gaattccaggataccaacaacattcagtatgcgtggatccgcctgctagcgggcgatacc
ggcaaagtgatgatcgttggcgatgacgatcagtcaatctacggctggcgcggagcgcag
gtggagaatattcagcgtttcctcaatgatttccccggtgctgaaactatccgtctggag
cagaactaccgctctaccagcaatattctgagcgccgcgaacgccctgattgaaaacaac
aacgggcgtctgggtaaaaaactgtggaccgatggcgcggacggtgagccgatttccctc
tattgcgcttttaacgaactcgatgaagcgcgttttgtggttaaccgtatcaaaacctgg
caggacaaaggcggggcgcttgccgagtgcgccattctctaccgcagcaacgcccagtcg
cgtgtgctggaagaagcactgttacaggcaagtatgccgtaccgtatttacggcgggatg
cgcttcttcgaacgccaggaaatcaaagacgcgctctcgtatctgcgcctgattgccaac
cgtaatgacgacgcggcctttgagcgcgtggtgaatacaccaacgcggggtattggtgac
cggacgctggacgtggtacgtcagacatcgcgcgatcgccagttaacgctgtggcaggca
tgtcgtgaactgttgcaggaaaaagccctcgccggacgtgctgccagtgccttacagcgg
tttatggaactgatcgacgccttagcgcaggaaactgccgatatgccgctgcatgtacag
actgaccgggtaattaaagactccggcctgcgcaccatgtacgagcaggagaaaggcgaa
aaaggccagacgcgtatcgaaaacttagaggaactggtaacggcgacgcgccagttcagc
tacaacgaagaagacgaagatttaatgccgctgcaggcattcctctcccatgcggcactg
gaagcgggcgaggggcaggcggatacctggcaggatgcggtgcagttgatgacgctacac
tcggcgaaagggctggagtttccgcaggtgtttatcgttggtatggaagaaggcatgttc
ccaagccagatgtcgctggatgaaggcggacgtctggaagaagaacgccgtctggcctac
gttggcgtaacccgcgcgatgcagaaactgacgctgacctacgcggaaacccgccgtctg
tatggcaaagaggtttaccatcgcccgtcgcgctttatcggcgagctgccggaagagtgt
gtggaagaggtgcgcctgcgcgccacggtaagccgcccggtcagccatcaacggatgggt
acgccgatggtcgagaacgacagcggctacaagctcggccagcgcgtacgccacgctaag
tttggtgaaggcaccatcgtcaatatggaaggcagcggtgagcatagccgtttgcaggtg
gcatttcagggccagggtattaaatggctggtggcggcttatgcccggttggagacggtg
tga
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