Escherichia coli UMNK88 (ETEC, porcine): UMNK88_1888
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Entry
UMNK88_1888 CDS
T02001
Name
(GenBank) D,D-dipeptide transport ATP-binding protein DdpF
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
eun
Escherichia coli UMNK88 (ETEC, porcine)
Pathway
eun02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
eun00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
UMNK88_1888
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eun02000
]
UMNK88_1888
Transporters [BR:
eun02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
UMNK88_1888
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
AAA_22
AAA_16
SMC_N
AAA_25
AAA
Sigma54_activat
ABC_ATPase
AAA_29
NACHT
AAA_5
RsgA_GTPase
RNA_helicase
AAA_13
ATP-synt_ab
AAA_18
nSTAND1
Propep_M14
PRK
nSTAND3
Rad17
NB-ARC
AAA_7
AAA_33
Mg_chelatase
ATPase
Motif
Other DBs
NCBI-ProteinID:
AEE56485
LinkDB
All DBs
Position
complement(1800387..1801313)
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AA seq
308 aa
AA seq
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MSDTLLTLRDVHINFPARKNWLGKTTEHVHVINGIDLQIRRGETLGIVGESGCGKSTLAQ
LLMGMLQPSHGQYIRSGSQRIMQMVFQDPLSSLNPRLPVWRIITEPLWIAKRSSEQQRRA
LAEELAVQVGIRPEYLDRLPHAFSGGQRQRIAIARALSSQPDVIVLDEPTSALDISVQAQ
ILNLLVTLQENHGLTYVLISHNVSVIRHMSDRVAVMYLGQIVELGDAQQVLTAPAHPYTR
LLLDSLPAIDKPLEEEWALRKTDLPGNRTLPQGCFFYERCPLATHGCEVRQSLAIREDGR
ELRCWRAL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
gtgtctgacacgttattaacgttacgcgacgtccatatcaatttcccggcccgtaaaaac
tggcttggtaaaactacggaacatgttcatgtgattaatggtattgatttacagatccgc
cgtggtgaaaccttagggatcgtcggcgagtcaggctgcggcaaaagcaccctcgcacag
cttttaatgggtatgctgcaaccgagccacgggcagtacatccgttctggctcacaacgc
attatgcagatggtgtttcaggacccgctctcttcgcttaatccgcgcttaccggtgtgg
cgcatcatcacagaaccgctctggatagctaagcgtagtagtgaacaacagcggcgagcg
ttggcagaggagttggctgtgcaggtgggtattcgtccggagtatctcgaccgcctgcct
catgcgttctccggcgggcagcggcaacgtatcgccattgccagagcactctcttcgcag
cctgacgtgattgtgcttgatgagccaacctctgcgctggatatctccgttcaggcgcag
atcctcaatttactggtaacgctacaggaaaatcacgggctgacctatgtgctgatttca
cacaatgtctcggtgatacgtcatatgagcgatcgggtggcggtgatgtatctcgggcag
attgtagaactgggcgacgcgcagcaggtgctgacggcacctgcacatccatacacccga
ttattgctggattccctccccgccattgataaaccgctggaggaagaatgggcattacgt
aaaacggatctgccgggaaaccgcacgttgccgcaaggctgttttttctacgaacgttgc
ccgctggcaacccacggatgtgaagtccggcaatcattagcaataagggaggacggacgt
gagctccggtgctggcgggcgctgtag
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