Escherichia coli UMNK88 (ETEC, porcine): UMNK88_1890
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Entry
UMNK88_1890 CDS
T02001
Name
(GenBank) D,D-dipeptide transport system permease DdpC
KO
K02034
peptide/nickel transport system permease protein
Organism
eun
Escherichia coli UMNK88 (ETEC, porcine)
Pathway
eun02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
eun00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
UMNK88_1890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eun02000
]
UMNK88_1890
Transporters [BR:
eun02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
UMNK88_1890
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
OppC_N
DUF5368
Motif
Other DBs
NCBI-ProteinID:
AEE56487
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Position
complement(1802289..1803185)
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AA seq
298 aa
AA seq
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MMLSEETSAVRPQKQTRFNGAKLVWMLKGSPLTVTGAVIIVLMLLMMIFSPWLATHDPNA
IDLTTRLLPPSAAHWFGTDEVGRDLFSRVLVGSQQSILAGLVVVAIAGMIGSLLGCLSGV
LGGRADAIIMRIMDIMLSIPSLVLTMALAAALGPSLFNAMLAIAIVRIPFYVRLARGQAL
VVRQYTYVQAAKTFGASRWHLISWHILRNSLPPLIVQASLDIGSAILMAATLGFIGLGAQ
QPSAEWGAMVANGRNYVLDQWWYCAFPGAAILLTAVGFNLFGDGIRDLLDPKAGGKQS
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
atgatgctaagcgaggaaacgtccgccgtacgcccacaaaaacaaacgcgatttaacggt
gcaaaactggtatggatgctgaaaggcagtccgctcaccgtgaccggcgcagtcatcatt
gtattaatgctactgatgatgattttttcaccgtggctggcgacgcatgatcccaacgcc
attgatttaaccacccgccttttgccgccttctgcggcgcactggtttggcaccgatgaa
gtgggacgcgatctgtttagccgcgtactggtcggcagtcagcaatcaattctcgccgga
ttagtcgtagttgccattgcgggtatgattggttcgctactcggatgtctatccggtgtg
cttggcggacgcgcagacgccatcatcatgcgcatcatggacattatgctgtcgattcct
tcgttggtactgacaatggcactggctgccgctctcgggccgagtttgtttaacgccatg
ctggcgattgctatagtgcgaattccgttttatgtgcgcctggcgcgggggcaagcatta
gttgtacgccagtatacctatgttcaggcggcgaaaacctttggcgcgtcgcgttggcat
ctgatcagctggcatattttacgtaattccctgccgccgctgatcgtgcaggcatcgctg
gatatcggtagcgcgattttaatggccgccacgttgggatttattggcctaggtgctcaa
caaccgagtgctgaatggggcgcgatggtagcaaatggtcgcaactatgtactcgatcag
tggtggtattgcgcatttccgggggcagcgattttgcttaccgccgtcgggtttaatctc
tttggtgatggtattcgcgatctgcttgacccgaaagcaggaggaaagcagtcatga
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