Escherichia coli UMNK88 (ETEC, porcine): UMNK88_4122
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Entry
UMNK88_4122 CDS
T02001
Name
(GenBank) catabolite gene activator protein
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
eun
Escherichia coli UMNK88 (ETEC, porcine)
Pathway
eun02020
Two-component system
eun02024
Quorum sensing
eun02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
eun00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
UMNK88_4122
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
UMNK88_4122
02026 Biofilm formation - Escherichia coli
UMNK88_4122
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eun03000
]
UMNK88_4122
Transcription factors [BR:
eun03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
UMNK88_4122
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
RepL
MarR
HTH_24
HTH_23
MarR_2
Sigma70_r4
HTH_36
HTH_11
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AEE58641
LinkDB
All DBs
Position
3973514..3974146
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AA seq
210 aa
AA seq
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MVLGKPQTDPTLEWFLSHCHIHKYPSKSTLIHQGEKAETLYYIVKGSVAVLIKDEEGKEM
ILSYLNQGDFIGELGLFEEGQERSAWVRAKTACEVAEISYKKFRQLIQVNPDILMRLSAQ
MARRLQVTSEKVGNLAFLDVTGRIAQTLLNLAKQPDAMTHPDGMQIKITRQEIGQIVGCS
RETVGRILKMLEDQNLISAHGKTIVVYGTR
NT seq
633 nt
NT seq
+upstream
nt +downstream
nt
atggtgcttggcaaaccgcaaacagacccgactctcgaatggttcttgtctcattgccac
attcataagtacccatccaagagcacgcttattcaccagggtgaaaaagcggaaacgctg
tactacatcgttaaaggctctgtggcagtgctgatcaaagacgaagagggtaaagaaatg
atcctctcctatctgaatcagggtgattttattggcgaactgggcctgtttgaagagggc
caggaacgtagcgcatgggtacgtgcgaaaaccgcctgtgaagtggctgaaatttcgtac
aaaaaatttcgccaattgattcaggtaaacccggacattctgatgcgtttgtctgcacag
atggcgcgtcgtctgcaagtcacttcagagaaagtgggcaacctggcgttcctcgacgtg
acgggccgcattgcacagactctgctgaatctggcaaaacaaccagacgctatgactcac
ccggacggtatgcaaatcaaaattacccgtcaggaaattggtcagattgtcggctgttct
cgtgaaaccgtgggacgcattctgaagatgctggaagatcagaacctgatctccgcacac
ggtaaaaccatcgtcgtttacggcactcgttaa
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