Escherichia coli UMNK88 (ETEC, porcine): UMNK88_4231
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Entry
UMNK88_4231 CDS
T02001
Symbol
rpoH
Name
(GenBank) alternative sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
eun
Escherichia coli UMNK88 (ETEC, porcine)
Brite
KEGG Orthology (KO) [BR:
eun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eun03021
]
UMNK88_4231 (rpoH)
Transcription machinery [BR:
eun03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
UMNK88_4231 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
UCR_14kD
HTH_25
HTH_3
SANT_DAMP1_like
WASH_WAHD
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
AEE58750
LinkDB
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Position
complement(4089731..4090585)
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AA seq
284 aa
AA seq
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MTDKMQSLALAPVGNLDSYIRAANAWPMLSADEERALAEKLHYHGDLEAAKTLILSHLRF
VVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVTSKDVREMESRMAAQDM
TFDLSSDDDSDSQPMAPVLYLQDKSSNFADGIEDDNWEEQAANRLTDAMQGLDERSQDII
RARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaaaatgcaaagtttagctttagccccagttggcaacctggattcctacatc
cgggcagctaacgcgtggccgatgttgtcggctgacgaggagcgggcgctggctgaaaag
ctgcattaccatggcgatctggaagcagctaaaacgctgatcctgtctcacctgcggttt
gttgttcatattgctcgtaattatgcgggctatggcctgccacaggcggatttgattcag
gaaggtaacatcggcctgatgaaagcagtgcgccgttttaacccggaagtgggtgtgcgc
ctggtctccttcgccgttcactggatcaaagcagagatccacgaatacgtcctgcgtaac
tggcgtattgtcaaagttgcgaccaccaaagcgcagcgcaaactgttcttcaacctgcgt
aaaaccaagcagcgtctgggctggtttaaccaggatgaagtcgaaatggtggcccgtgaa
ctgggcgtaaccagcaaagacgttcgtgagatggaatcacgtatggcggcacaggacatg
acctttgacctgtcttccgacgacgattccgacagccagccgatggcaccggtgctctat
ctgcaggataaatcatctaactttgccgacggcatcgaagatgataactgggaagagcag
gcggcaaaccgtctgaccgacgcgatgcaaggtctggacgagcgtagccaggacatcatc
cgcgcgcgctggctggacgaagacaacaagtccacgttgcaggaactggctgaccgttac
ggcgtttccgctgagcgtgtgcgccagctggaaaagaacgcgatgaaaaaattgcgtgct
gctatagaagcgtaa
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