Escherichia coli UMNK88 (ETEC, porcine): UMNK88_4405
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Entry
UMNK88_4405 CDS
T02001
Symbol
rfaD
Name
(GenBank) ADP-glyceromanno-heptose 6-epimerase RfaD
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
eun
Escherichia coli UMNK88 (ETEC, porcine)
Pathway
eun00541
Biosynthesis of various nucleotide sugars
eun01100
Metabolic pathways
eun01250
Biosynthesis of nucleotide sugars
Module
eun_M00064
ADP-LDmanHep biosynthesis, sedoheptulose-7P => ADP-LDmanHep
Brite
KEGG Orthology (KO) [BR:
eun00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
UMNK88_4405 (rfaD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
eun01005
]
UMNK88_4405 (rfaD)
Enzymes [BR:
eun01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
UMNK88_4405 (rfaD)
Lipopolysaccharide biosynthesis proteins [BR:
eun01005
]
Core region
UMNK88_4405 (rfaD)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
Polysacc_synt_2
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
AEE58923
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Position
4282714..4283646
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AA seq
310 aa
AA seq
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MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLVDLDIADYMDKEDFLIQI
IAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATY
GGRTSDFIESREYEKPLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKGS
MASVAFHLNTQLNKGESPKLFEGSENFKRDFVYVGDVADVNLWFLENGVSGIFNLGTGRA
ESFQAVADATLAYHKKGQIEYIPFPDKLKGRYQAFTQADLTNLRAAGYDKPFKTVAEGVM
EYMAWLNRDA
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgttaccggcggcgcgggctttatcggcagcaacatcgttaaggccctgaat
gataaaggcatcaccgatattctggtggtggacaacctgaaagacggcaccaagtttgtg
aacctggtggatctggatatcgcggactatatggataaggaagacttcctgatccagatt
atagctggcgaagagttcggcgatgtcgaagcaattttccacgaaggcgcatgctcttcc
accaccgagtgggacggcaagtatatgatggataacaactatcaatactccaaggagctg
ctgcactactgcctggagcgcgaaatcccgttcctgtacgcttcttccgcagccacctac
ggcggacgcacctccgactttattgaatcccgcgagtacgaaaaaccgttgaacgtctac
ggttactcaaaattcctgtttgatgaatatgttcgccaaatcctgcctgaagcgaactcg
cagattgttggcttccgctatttcaacgtttatggaccgcgtgaaggccataaaggcagc
atggcgagcgtcgctttccatctcaacactcagcttaacaaaggtgaatcaccgaagctg
tttgaaggtagcgagaacttcaaacgtgacttcgtctatgtgggcgacgtggcagatgta
aacctgtggttcctggaaaatggcgtttccggtatcttcaacctcggtactggtcgtgcg
gaatccttccaggccgtagcagatgctactctggcttatcacaagaaaggccagatcgaa
tacattccgttcccggataagctgaaaggccgctaccaggcgttcactcaggcagatctg
acaaatctgcgcgcggcgggttacgacaaaccgttcaaaaccgttgctgaaggtgtaatg
gaatacatggcctggctgaatcgcgacgcataa
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