Escherichia coli UMNK88 (ETEC, porcine): UMNK88_4407
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Entry
UMNK88_4407 CDS
T02001
Symbol
rfaC
Name
(GenBank) lipopolysaccharide heptosyltransferase RfaC
KO
K02841
lipopolysaccharide heptosyltransferase I [EC:
2.4.99.23
]
Organism
eun
Escherichia coli UMNK88 (ETEC, porcine)
Pathway
eun00540
Lipopolysaccharide biosynthesis
eun01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
eun00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
UMNK88_4407 (rfaC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
eun01005
]
UMNK88_4407 (rfaC)
Enzymes [BR:
eun01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.23 lipopolysaccharide heptosyltransferase I
UMNK88_4407 (rfaC)
Lipopolysaccharide biosynthesis proteins [BR:
eun01005
]
Core region
UMNK88_4407 (rfaC)
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
UPF0181
Glyco_trans_4_4
Motif
Other DBs
NCBI-ProteinID:
AEE58925
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Position
4284706..4285665
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AA seq
319 aa
AA seq
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MRVLIVKTSSMGDVLHTLPALTDAQQAIPGIKFDWVVEEGFAQIPSWHAAVERVIPVAIR
RWRKAWFSAPIKAERKAFREALQAENYDAVIDAQGLVKSAALVTRLAHGVKHGLDWQTAR
EPLASLFYNCKHHIAKQQHAVERTRELFAKSLGYSKPQTQGDYAIAQHFLTNLPTDAGEY
AVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEEERAKRLAEGFAYVEVLP
KMSLEGVARVLAGAKFVVSVDTGLSHLTAALDRPNITVYGPTDPGLIGGYGKNQMVCRAP
LMNLNNLEAAAVYKKITLI
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgcgggttttgatcgttaaaacatcgtcgatgggcgatgttctccatacgttgcccgca
ctcactgatgcccagcaggcaatcccagggattaagtttgactgggtggtggaagaaggg
ttcgcacagattccttcctggcacgctgccgttgagcgagttattcctgtggcaatacgt
cgctggcgtaaagcctggttctcggcccccataaaagctgaacgcaaagcgtttcgtgaa
gcgctacaagcagagaactatgacgcagttatcgacgctcaggggctggtaaaaagcgcg
gcactggtgacacgtctggcgcatggcgtaaagcatggattggactggcaaaccgctcgc
gaacctttagccagcctgttttacaattgtaagcatcatattgcaaaacagcagcacgcc
gtagaacgcacccgcgaactgtttgccaaaagtttgggctatagcaaaccgcaaacccag
ggcgattatgctatcgcacagcattttctgacgaacctgcctacagatgctggcgaatat
gccgtatttcttcatgcgacgacccgtgatgataaacactggccggaagaacactggcga
gaattgattggtttactggctgattcaggaatacggattaaacttccgtggggcgcgccg
catgaggaagaacgggcgaaacgactggcggaaggatttgcttatgttgaagtattgccg
aagatgagtctggaaggcgttgcccgcgtgctggccggggctaaatttgtagtgtcggtg
gatacggggttaagccatttaacggcggcactggatagacccaatatcacggtttatgga
cctaccgaccctggattaattggcgggtatgggaagaatcagatggtttgtagggctccg
ctaatgaatttaaataatttagaagcagcggctgtttataaaaaaatcacattgatttaa
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