Escherichia coli UMNK88 (ETEC, porcine): UMNK88_4416
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Entry
UMNK88_4416 CDS
T02001
Symbol
rfaQ
Name
(GenBank) lipopolysaccharide core biosynthesis protein RfaQ
KO
K02849
lipopolysaccharide heptosyltransferase III [EC:
2.4.99.25
]
Organism
eun
Escherichia coli UMNK88 (ETEC, porcine)
Pathway
eun00540
Lipopolysaccharide biosynthesis
eun01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
eun00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
UMNK88_4416 (rfaQ)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
eun01005
]
UMNK88_4416 (rfaQ)
Enzymes [BR:
eun01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.25 lipopolysaccharide heptosyltransferase III
UMNK88_4416 (rfaQ)
Lipopolysaccharide biosynthesis proteins [BR:
eun01005
]
Core region
UMNK88_4416 (rfaQ)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_9
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
AEE58934
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Position
complement(4293517..4294539)
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AA seq
340 aa
AA seq
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MRFHGDMLLTTPVISSLKKNYPDAKIDVLLYQDTIPILSENPEINALYGIKNKKAKASEK
IANFFHLIKVLRANKYDLIVNLTDQWMVAILVRLLNARVKISQDYHHRQSAFWRKSFTHL
VPLQGGNVVESNLSVLIPLGLDSLVKQTTMSYPPASWKRMRRELDHAGVGQNYVVIQPTA
RQIFKCWDNAKFSAVIDALHARGYEVVLTSGPDKDDLACVNEIAQGCQTPPVTALAGKVT
FPELGALIDHAQLFIGVDSAPAHIAAAVNTPLISLFGATDHIFWRPWSNNMIQFWAGDYR
EMPTRDQRDRNEMYLSVIPAADVIAAVDKLLPSSTTGTSL
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgcgttttcatggggatatgttattaactactcccgtcattagttcgctgaaaaaaaat
taccctgacgcaaaaatcgatgtgctgctttatcaggacaccatcccgatcctgtctgaa
aatccagagattaacgcgctctacggcataaaaaataaaaaagcaaaagcctcagaaaaa
attgccaacttttttcatctcatcaaggtattacgtgccaataagtatgaccttatcgtc
aatcttaccgatcaatggatggttgctatactggttcgcttattaaatgcccgtgtgaaa
atttcccaggattatcatcatcggcagtctgctttttggcgtaaaagtttcacccatttg
gtgccgttgcagggtggaaatgtggtggaaagtaacttatccgtgctgataccattggga
cttgattcgttggtgaagcagacaaccatgagttacccgcctgcaagctggaaacgtatg
cgtcgcgaacttgatcacgctggtgttggacaaaattatgtggttatccaacctacggcg
cggcaaatcttcaaatgctgggacaacgccaagttttccgctgtgattgatgccttacat
gctcgtggttatgaagtcgttctgacgtccggcccagataaagacgatctggcctgcgtc
aatgaaattgcgcagggatgccagacgccaccagtaacggcgctggctggaaaggtgacc
ttcccggaacttggtgcgttaatcgatcatgcgcagctgtttattggcgttgattccgca
ccggcgcatattgccgctgcagttaatacgccgctgatatcgctgtttggtgcgacagac
catattttctggcgtccctggtcaaataacatgattcaattctgggcgggagattaccgg
gaaatgccaacgcgcgatcagcgtgaccgaaatgagatgtatctttcggttattccggcg
gcagatgtcattgctgctgtcgataaattactgccctcctccacgacaggtacgtcgtta
tga
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