Escherichia coli UMNK88 (ETEC, porcine): UMNK88_4995
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Entry
UMNK88_4995 CDS
T02001
Symbol
lysS
Name
(GenBank) lysyl-tRNA synthetase LysS
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
eun
Escherichia coli UMNK88 (ETEC, porcine)
Pathway
eun00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
eun00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
UMNK88_4995 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
eun01007
]
UMNK88_4995 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eun03016
]
UMNK88_4995 (lysS)
Enzymes [BR:
eun01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
UMNK88_4995 (lysS)
Amino acid related enzymes [BR:
eun01007
]
Aminoacyl-tRNA synthetase
Class II (A)
UMNK88_4995 (lysS)
Transfer RNA biogenesis [BR:
eun03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
UMNK88_4995 (lysS)
Prokaryotic type
Other AARSs
UMNK88_4995 (lysS)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
DUF2333
Motif
Other DBs
NCBI-ProteinID:
AEE59472
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All DBs
Position
complement(4876471..4877988)
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AA seq
505 aa
AA seq
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MSEQETRGANEAIDFNDELRNRREKLAALRQQGVAFPNDFRRDHTSDQLHEEFDAKDNQE
LESLNIEVSVAGRMMTRRIMGKASFVTLQDVGGRIQLYVARDSLPEGVYNDQFKKWDLGD
IIGARGTLFKTQTGELSIHCTELRLLTKALRPLPDKFHGLQDQEVRYRQRYLDLIANDKS
RQTFVVRSKILAAIRQFMVARGFMEVETPMMQVIPGGASARPFITHHNALDLDMYLRIAP
ELYLKRLVVGGFERVFEINRNFRNEGISVRHNPEFTMMELYMAYADYHDLIELTESLFRT
LAQEVLGTTKVTYGEHVFDFGKPFEKLTMREAIKKYRPETDMADLDNFDAAKALAESIGI
TVEKSWGLGRIVTEIFDEVAEAHLIQPTFITEYPAEVSPLARRNDVNPEITDRFEFFIGG
REIGNGFSELNDAEDQAERFQEQVNAKAAGDDEAMFYDEDYVTALEYGLPPTAVLGIGID
RMIMLFTNSHTIRDVILFPAMRPQK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacaagaaacacggggagccaatgaggctattgattttaacgatgaactgaga
aatcgccgcgaaaaactggcggcactacgtcagcaaggtgtggcgtttcccaatgatttt
cgccgcgaccatacctctgaccagttgcacgaagagtttgatgcgaaggataaccaggaa
ctggaatccttaaacattgaagtctcggttgctggccgaatgatgacccgtcgtatcatg
gggaaagcctcctttgtaacgttgcaggatgtcggtggccgtattcaactgtacgtcgca
cgagatagcctgccagaaggtgtttataacgatcagtttaaaaaatgggatctgggtgac
attatcggtgcccgcggtacgctgtttaagacgcaaacgggtgagctttccattcactgt
actgagttgcgcctgctgacaaaagcactacgtcctttaccagataaattccatggtctg
caggatcaggaagtccgttatcgtcaacgttatctggacctcatcgctaacgataaatcc
cgtcaaacgtttgttgtccgttcaaaaattctggccgctatccgtcagttcatggtcgcg
cgcggctttatggaagtagaaaccccgatgatgcaggtaattccaggtggggcatctgct
cgcccatttattacccatcataatgctctggatttagatatgtatctgcgtatcgcgccg
gagctgtatctgaaacgtctggttgtaggcggttttgaacgggtattcgaaatcaaccgt
aacttccgtaatgaaggtatttctgttcgccataatcctgagttcacaatgatggaactc
tacatggcgtatgcggattaccacgatttgattgaactgacagagtcactgttccgcacc
ctggcacaagaggttctgggtaccactaaagtcacttatggcgagcatgtgtttgatttc
ggcaaaccgtttgaaaaactcaccatgcgcgaagcaatcaaaaaatatcgtccagaaacc
gatatggccgacctggataattttgatgctgctaaagcattagctgaatctatcggaatt
acggtagagaaaagctgggggctgggacgtattgtcacggagatctttgatgaagtggca
gaagcacatctgattcagccaacctttattacggaatatccggcagaagtgtccccgctg
gcgcgccgtaatgatgttaacccggaaatcaccgaccgttttgaattcttcatcggtggt
cgtgaaatcggtaatggttttagcgaattaaacgacgcagaagatcaggctgaacgtttc
caggaacaggttaacgctaaagctgcaggtgacgacgaagccatgttctatgacgaagat
tacgtgactgcgctggaatatggtctgccgccaaccgctgttctgggtattggcatcgac
cgaatgattatgctgtttacaaacagtcatactattcgtgacgttattctcttcccggcg
atgcgcccacagaaataa
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