Escherichia coli UMNK88 (ETEC, porcine): UMNK88_5209
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Entry
UMNK88_5209 CDS
T02001
Name
(GenBank) conserved hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
eun
Escherichia coli UMNK88 (ETEC, porcine)
Brite
KEGG Orthology (KO) [BR:
eun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
eun03400
]
UMNK88_5209
DNA repair and recombination proteins [BR:
eun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
UMNK88_5209
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA_10
TrwB_AAD_bind
ResIII
AAA_16
FtsK_SpoIIIE
SLFN-g3_helicase
T2SSE
AAA_30
AAA
AAA_7
AAA_19
Hydrolase
CbiA
SRP54
AAA_18
AAA_28
ORC-CDC6-like
NTPase_1
nSTAND3
AAA_25
AAA_6
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
AEE59676
LinkDB
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Position
complement(5081499..5083028)
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AA seq
509 aa
AA seq
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MSEPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVK
GDLTGIAQAGTASEKLLTRLKNIGVNDWQPHANPVVVWDIFGEKGHPVRATVSDLGPLLL
ARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASV
GAIQRGLLSLEQQGAAHFFGEPMLDIKDWMRTDANGKGVINILSAEKLYQMPKLYAASLL
WMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFV
SQNPSDIPDNVLGQLGNRVQHALRTFTPKDQKAVKAAAQTMRVNPAFDTEKAIQKLGTGE
ALISFLDAKGSPSVVERAMVIAPCSRMGPVTEDERNGLINHSPVYGKYEDEVDRESAYEM
LQKGFQASTEQQNNPPAKGKEVAVDDGILGGLKDILFGTTGPRGGKKDGVVQTMAKSAAR
QVTNQIVRGMLGSLLGGEKKVSQARFVFA
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacccctgttaattgcccgcacgccggacacagaactgtttttactgccggga
atggctaaccgtcacgggctgattactggcgcaacggggacgggtaaaaccgttacgctg
caaaaactggcagagtcattgtcggaaatcggcgtgccggtgtttatggctgatgtgaaa
ggcgatctgaccggtatcgcgcaggcaggaacggcgtcggaaaaactgctcacaaggctt
aaaaatatcggcgtcaatgactggcaaccgcatgccaatccggtggtggtgtgggatatc
tttggcgagaaaggccatccggtgcgggcgacggtttcggatctggggccgctgttgctg
gcgcggctgttgaatctcaacgatgtgcaatctggcgtgctgaatatcatcttccgcatt
gctgacgatcaggggctgttactgctcgactttaaagatttgcgggcgattacccaatac
atcggcgataacgccaaatctttccagaatcagtacggaaatatcagtagcgcatcggtt
ggtgccatccagcgcgggctgttgtcgctggaacagcaaggcgcagcacacttctttggt
gagccgatgctggatatcaaagactggatgcgcaccgatgccaacggtaaaggcgttatc
aatatcctcagcgccgagaagctttatcagatgccgaaactgtatgccgccagcctgttg
tggatgctctcggagttgtatgaacaattgccggaagcgggcgatctggagaaaccaaaa
ctggtgtttttcttcgacgaggcacatctgctgtttaacgatgcaccgcaggtactgctg
gataagattgagcaggtgataaggcttattcgctcaaaaggcgtgggcgtctggttcgtt
tcgcaaaatccgtccgatattccggataacgtgctcggccagctcggtaatcgcgttcaa
cacgctttgcggacttttacgcccaaagatcagaaagcggtaaaagctgcggcgcaaacc
atgcgggtcaatccggcatttgataccgaaaaggcgattcagaaactgggcaccggcgag
gcgttgatctcttttctggatgcgaaaggaagcccttctgtggtggaacgggcgatggtg
attgcgccttgttcgcggatgggaccggtgacggaagatgagcgtaatggcttgattaat
cactctccggtgtatggcaaatatgaggatgaggtggaccgggaatccgcctatgagatg
ttgcaaaaaggctttcaggccagtaccgagcagcaaaataatccccccgcgaaagggaaa
gaggtagcggtggatgacggcattcttggtggattgaaggatattttgttcggcactacc
ggaccacgcggcgggaagaaagatggtgtggtgcaaacaatggccaaaagcgccgctcgc
caggtgacgaatcagattgtacgcgggatgttggggagtttgctggggggggagaagaag
gtaagtcaggcgagatttgtctttgcctga
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