Escherichia coli UMNK88 (ETEC, porcine): UMNK88_pK8848
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Entry
UMNK88_pK8848 CDS
T02001
Symbol
rafB
Name
(GenBank) raffinose permease RafB
KO
K02532
MFS transporter, OHS family, lactose permease
Organism
eun
Escherichia coli UMNK88 (ETEC, porcine)
Brite
KEGG Orthology (KO) [BR:
eun00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eun02000
]
UMNK88_pK8848 (rafB)
Transporters [BR:
eun02000
]
Major facilitator superfamily (MFS)
Sugar transporters
Oligosaccharide:H+ symporter (OHS) family [TC:
2.A.1.5
]
UMNK88_pK8848 (rafB)
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Gene cluster
GFIT
Motif
Pfam:
LacY_symp
MFS_1
MFS_1_like
MFS_2
Motif
Other DBs
NCBI-ProteinID:
AEE59832
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Position
pUMNK88_K88:complement(43556..44899)
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AA seq
447 aa
AA seq
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MKRDTEPQLRPVSQYYPVRVRIMNSASTHKNTDFWIFGLFFFLYFFIMATCFPFLPVWLS
DVVGLSKTDTGIVFSCLSLFAISFQPLLGVISDRLGLKKNLIWSISLLLVFFAPFFLYVF
APLLHLNIWAGALTGGVFIGFVFSAGAGAIEAYIERVSRSSGFEYGKARMFGCLGWALCA
TMAGILFNVDPSLVFWMGSGGALLLLLLLYLARPSTSQTAMVMNALGANSSLISTKMVFS
LFRMRQMWMFVLYTIGVACVYDVFDQQFAIFFRSFFDTPQAGIKAFGFATTAGEICNAII
MFCTPWIINRIGAKNTLLVAGGIMTIRITGSAFATTMTEVVILKMLHALEVPFLLVGAFK
YITGVFDTRLSATVYLIGFQFSKQLAAILLSTFAGHLYDRMGFQNTYFVLGMIVLTVTVI
SAFTLSSSPGIVHPSVEKAPVAHSEIN
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
gtgaagagagatacggagcctcagctccgtcctgtttctcaatattatcccgtgagggta
agaataatgaattctgcaagtacgcataaaaatactgatttctggattttcggtctgttc
ttttttctctactttttcatcatggcaacctgttttccgtttttgcctgtatggctgtcc
gatgtggtcggactgagtaaaacggatacaggtatagtcttttcatgtctgtctctgttt
gccatcagtttccagccattgcttggggtcatatcagatcgcctgggactgaaaaaaaac
ctgatctggagtatcagcctgttactggtatttttcgcccccttttttttatatgtattt
gcgcccctgttgcacctcaatatctgggcaggtgcattgactggcggtgtctttattggt
tttgttttttctgcaggtgccggagctattgaagcttatatagagcgggtcagtcgcagt
agtggatttgaatacggtaaagcgaggatgttcgggtgtctgggttgggcgttatgtgca
actatggccggaatactttttaatgtcgatccttctctggttttctggatggggtcagga
ggcgcattattgttgctgcttctgttgtatctggcgcgccccagtaccagccagacggca
atggttatgaatgcactgggtgccaattcttccctgatttctaccaaaatggtcttcagc
ctgtttcgtatgcgtcagatgtggatgtttgttctatatacgataggtgtggcctgtgtc
tatgatgtatttgatcagcagtttgccatattttttcgttcattttttgacactccgcag
gcaggaataaaggcattcggatttgccaccactgcgggggagatttgtaatgccattatc
atgttctgtacaccatggataattaatcgcattggtgccaaaaataccctgcttgttgcg
gggggaattatgactatccgcattaccggttctgcttttgccaccaccatgacagaagtg
gtgattctgaaaatgcttcacgctcttgaagttccatttttgctggttggggcattcaaa
tatattacgggcgtgtttgacacccgactgtcagcgactgtttatttaattggttttcag
ttttccaaacaacttgctgcaatacttctctctacctttgccggccacctgtatgatcgt
atgggattccagaatacgtattttgtgctcgggatgattgttctgactgttaccgttata
tcagctttcacgctgagttcttcccctgggatcgtacacccttctgttgaaaaagcccct
gtagcacattcggagattaactga
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