Escherichia coli UMNK88 (ETEC, porcine): UMNK88_pK8849
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Entry
UMNK88_pK8849 CDS
T02001
Symbol
rafA
Name
(GenBank) alpha-D-galactosidase RafA
KO
K07407
alpha-galactosidase [EC:
3.2.1.22
]
Organism
eun
Escherichia coli UMNK88 (ETEC, porcine)
Pathway
eun00052
Galactose metabolism
eun00561
Glycerolipid metabolism
eun00600
Sphingolipid metabolism
eun01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
eun00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
UMNK88_pK8849 (rafA)
09103 Lipid metabolism
00561 Glycerolipid metabolism
UMNK88_pK8849 (rafA)
00600 Sphingolipid metabolism
UMNK88_pK8849 (rafA)
Enzymes [BR:
eun01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.22 alpha-galactosidase
UMNK88_pK8849 (rafA)
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Gene cluster
GFIT
Motif
Pfam:
Melibiase
Glyco_hydro_36N
Glyco_hydro_36C
Melibiase_2
Motif
Other DBs
NCBI-ProteinID:
AEE59833
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Position
pUMNK88_K88:complement(44896..47022)
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AA seq
708 aa
AA seq
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MISKYCRLSSPRSDLIIKTHPHAEIIWWGSALKHFSPDDCASLERPVANGRLDIDTPLTL
IAENALGLFSSPGLEGHRNGLDASPVFYTVDVEHTENTLRLTSEDSVAGLRLVSELVMTP
SGILKVRHALTNLREGDWQINRFAITLPVAERAEEVMAFHGRWTREFQPHRVRLTHDAFV
LENRRGRTSHEHFPALIVGTPGFSEQQGEVWAVHLGWSGNHRMRCEAKTDGRRYVQAEAL
WMPGEKALRKNETLYTPWLYACHSADGLNGMSQQYHRFLRDEIIRFPEQKLRPVHLNTWE
GIYFNHNPDYIMQMAERAAALGVERFIIDDGWFKGRNDDRAALGDWYTDEQKYPNGLMPV
INHVKSLGMEFGIWVEPEMINPDSDLFRLHPDWILSMPGYSQPTGRYQYVLNLNIPEAFD
YIYKRFLWLLGEHPVDYVKWDMNRELVQAGHEGRAAADAQTRQFYRLLDLLRERFPHVEF
ESCASGGGRIDFEVLKRTHRFWASDNNDALERCTIQRGMSYFFPPEVMGAHIGHRRCHAT
FRQHSIAFRGLTALFGHMGLELDPVAADAKESDGYRRYALLYKEWRQLIHTGVLWRVDMP
DSSIQVQGVVSPDQSQALFMISQLAMPDYTLPGILRFPGLAAEVRYRLRVIDHPEIQLVG
EGGHTMRRLPAWMNQPLEASGEWLAKGGIQLPVLDPESAILIALERAV
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgatttcaaagtactgcagactgagcagtcctcgctctgatttaattattaaaacccat
ccgcatgcagaaattatctggtggggctctgcactgaaacatttctcaccggatgactgt
gccagcctggaaagaccagttgcgaatggtcgtctggatattgatacgccactgacactg
atcgctgaaaatgcccttggactttttagttctccgggactggaaggacacagaaatgga
ctggatgcatctcctgttttttatacagttgacgtggaacataccgaaaacaccctgaga
cttaccagtgaagattcggtagccggcctgcgtctggtcagcgagctggtgatgacgcca
tcggggattctgaaagttcgtcatgcactgaccaacctcagagagggagactggcagata
aatcgtttcgcaatcactttacctgtagctgaacgtgcggaagaagtcatggcctttcac
ggacgctggactcgtgaatttcagccgcacagggtacgtcttactcatgatgcttttgtt
ctggaaaatcgcagagggcggacatctcatgagcattttccggcgctgattgtcggcaca
ccaggcttctcggaacaacagggagaagtgtgggctgtgcatctggggtggagtggaaat
caccgcatgagatgtgaggcaaaaactgatggcaggcgttacgtacaggctgaggctctg
tggatgccgggtgagaaggctctcaggaagaatgaaaccctgtacaccccgtggctatat
gcctgccactctgcggatggcctgaatggaatgagtcagcaataccatcgttttttgcgt
gatgaaattatccgtttccctgagcaaaaactccgccccgtacatctcaatacctgggaa
ggtatttatttcaatcacaatcctgattacatcatgcagatggctgagcgtgcagcagca
ctgggcgttgaacgtttcattattgatgatggctggtttaaaggacgtaacgatgaccgc
gcggctctgggcgactggtataccgatgaacagaaatacccgaacgggctgatgccggtt
attaatcatgtgaaatctctcggtatggagtttggtatatgggttgaaccagaaatgatt
aatccggattctgacctgtttcgtcttcatccggactggatattgtcaatgccaggatat
tctcagccaaccggaagatatcagtatgttcttaacctgaatattccggaggcctttgat
tatatttataaacgtttcttatggttactgggagaacatccggttgattatgtgaaatgg
gacatgaatcgtgagcttgtacaggcagggcatgaaggccgtgcggcagcagatgcacag
acccgtcagttctatcgattgcttgatctcctccgtgaacgttttccacatgttgagttt
gagtcctgtgcttccggtggggggcgtattgacttcgaagtcctgaaacgcacacaccgg
ttctgggcatctgacaataatgatgccctggagcgctgcaccatacaacgtggcatgagt
tactttttccctcctgaggtgatgggggcacatattggccatcgccgctgccatgcaact
ttccggcagcacagcatcgcttttcgtgggctgacggcattgttcggccatatggggctg
gagctggatccggtagccgcagatgcgaaggaatctgatggttatcgccggtatgccttg
ctctataaagaatggcgacaactgattcatacaggtgttctctggcgtgtggatatgccg
gattcttcgatacaggttcagggagtcgtcagccctgatcagtctcaggctctttttatg
atcagccagcttgcaatgccggattacaccttaccaggcatacttcgttttcccggactg
gcggcagaagtgcgttaccggcttcgggttattgatcacccggaaattcaactggttggt
gaaggtggtcataccatgcgcagattaccagcctggatgaaccagcccctcgaggccagt
ggtgaatggctggcaaagggagggattcagctccccgtactggatcctgagagcgcgatt
ttgatagcacttgaaagagctgtgtga
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