Escherichia coli UMNK88 (ETEC, porcine): pUMNK88_112
Help
Entry
pUMNK88_112 CDS
T02001
Symbol
dcm
Name
(GenBank) putative cytosine-specific DNA methylase protein Dcm
KO
K00558
DNA (cytosine-5)-methyltransferase 1 [EC:
2.1.1.37
]
Organism
eun
Escherichia coli UMNK88 (ETEC, porcine)
Pathway
eun00270
Cysteine and methionine metabolism
eun01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
eun00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
pUMNK88_112 (dcm)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eun03000
]
pUMNK88_112 (dcm)
03032 DNA replication proteins [BR:
eun03032
]
pUMNK88_112 (dcm)
03036 Chromosome and associated proteins [BR:
eun03036
]
pUMNK88_112 (dcm)
09183 Protein families: signaling and cellular processes
02048 Prokaryotic defense system [BR:
eun02048
]
pUMNK88_112 (dcm)
Enzymes [BR:
eun01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.37 DNA (cytosine-5-)-methyltransferase
pUMNK88_112 (dcm)
Transcription factors [BR:
eun03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
pUMNK88_112 (dcm)
DNA replication proteins [BR:
eun03032
]
Eukaryotic type
DNA Replication Termination Factors
DNA methylation enzymes
pUMNK88_112 (dcm)
Chromosome and associated proteins [BR:
eun03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
pUMNK88_112 (dcm)
Prokaryotic defense system [BR:
eun02048
]
Restriction and modification system (R-M system)
Type II R-M system
DNA methyltransferases
pUMNK88_112 (dcm)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_methylase
Pesticin_RB
DUF5363
Motif
Other DBs
NCBI-ProteinID:
ADM62653
LinkDB
All DBs
Position
pUMNK88:95851..97476
Genome browser
AA seq
541 aa
AA seq
DB search
MATIVNTKLGEHRGKKRVWLEGQKLLREGYYPGMKYDLELKDSQVVLRVKEEGKFTISKR
ERNGRVSPIIDLTVQELATVFDGVEMLRVFIRNGAIVISAHHQQERVIERVNRLISKLEN
GESLSVCSLFHGGGVLDKAIHAGFHKAGIASAISVAVEMEGKYLDSSLANNPELWNEDSI
VIESPIQAVNLSKRPPQVDVLMGGIPCTGASKSGRSKNKLEFAESHEAAGAMFFNFLQFV
EALNPAVVLIENVPEYQNTASMEVIRSVLSSLGYSLQERILDGNEFGVIERRKRLCVVAL
SHGIDGFELEKVQPVRTKESRIQDILEPVPLDSERWKSFDYLAEKELRDKAAGKGFSRQL
LTGDDEFCGTIGKDYAKCRSTEPFIVHPEQPELSRIFTPTEHCRVKGIPEELIQGLSDTI
AHQILGQSVVFPAFEALALALGNSLWSWVGMMPIMVEVVDESQPVIGGEDFHWATALVDA
KGTLKLSPAAKKQGMPFNIMDGQLAVYSPNGTKKSCGHEPCEYLPVMMSGDAIMVTSSLV
H
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atggctactatcgtaaacaccaagttaggagaacatcgaggcaagaagcgcgtctggctg
gaaggccaaaagctactgcgtgaaggttactatcctggcatgaagtatgatctggagctg
aaagattcccaggttgtgcttcgcgtcaaagaggagggtaagttcaccatcagtaagcgt
gagcgcaatggccgggtgtctccaatcatcgatctgaccgtgcaggagcttgctaccgtt
tttgacggtgtagagatgctccgcgtgttcatccgtaacggcgcaattgtgatctctgct
caccatcaacaagagcgagtgatcgagcgcgtcaaccggcttatcagtaagctggagaat
ggagaatcgctttcggtatgcagcctctttcatgggggtggtgtgcttgataaagcgatt
cacgccggttttcacaaggcgggaattgccagtgccatatctgtggccgtggagatggaa
gggaaatatctcgattcgtctttggcaaataacccggagctttggaacgaagattctatt
gttatcgaatcgccaatccaggctgtgaatctcagcaaacgcccaccacaggtggatgtt
ttgatggggggcataccgtgtaccggcgcgtcaaagtcaggtcgcagtaagaacaagttg
gagtttgccgaatcgcatgaggcggcaggtgccatgttcttcaacttcctgcaattcgta
gaagcgctaaacccagccgttgtgctgattgagaacgtgcctgagtaccagaacaccgct
tcgatggaagtgattcgttcggtgctctcttcgttgggttactccctacaagagcgcatt
ctcgacggcaatgagtttggggttattgagcgccgcaagcgtctttgtgttgttgcgctt
tcccacgggatcgacgggtttgaacttgagaaggttcagcctgttcgcaccaaggaaagt
cgcatacaggacatcctggagccagttccgctcgattctgaacgttggaagtcatttgac
tatctggctgagaaggagttgagagacaaagctgctggcaaggggttctctcgccagctt
ctgactggcgacgatgagttttgcggcaccataggtaaggactatgcaaaatgcagaagt
accgaacctttcattgttcatccagaacagccggagttgtctcgcatctttacaccgaca
gaacattgtcgagtgaaagggataccagaggaactcatccaaggtctgtcggacactatt
gcccaccagattctcgggcaatcggtagtctttcccgcgttcgaggctttagccctcgca
ttagggaacagcctgtggagctgggttggaatgatgccaatcatggtcgaagtcgtggat
gaatcacagccggtgatcggtggtgaagacttccattgggcaacggcattggttgacgca
aagggcactctcaagctgtcaccggcagcgaaaaaacaggggatgcccttcaacattatg
gatggtcaattggctgtctattcacctaacggaactaaaaagagctgcggccatgagcct
tgcgaatatctcccggtaatgatgtccggagacgcaatcatggtcacttcatctttggtt
cattag
DBGET
integrated database retrieval system
