Escherichia coli UMNK88 (ETEC, porcine): pUMNK88_172
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Entry
pUMNK88_172 CDS
T02001
Name
(GenBank) conserved hypothetical protein
KO
K03746
DNA-binding protein H-NS
Organism
eun
Escherichia coli UMNK88 (ETEC, porcine)
Brite
KEGG Orthology (KO) [BR:
eun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eun03036
]
pUMNK88_172
03400 DNA repair and recombination proteins [BR:
eun03400
]
pUMNK88_172
Chromosome and associated proteins [BR:
eun03036
]
Prokaryotic type
Nucleoid associated proteins
HNS (histone-like nucleoid structuring protein)
pUMNK88_172
DNA repair and recombination proteins [BR:
eun03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
pUMNK88_172
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Histone_HNS_N
Histone_HNS
DUF382
Birna_VP3
Intron_maturas2
Med21
Motif
Other DBs
NCBI-ProteinID:
ADM62713
LinkDB
All DBs
Position
pUMNK88:complement(158683..159102)
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AA seq
139 aa
AA seq
DB search
MKDHEEFSTLSAAERRELIIAELKRKSRIRTLLRGLPLDEVREIIDRMKGVLNELEEEYK
KREEEEKEKRAQAERIMSDMESCGVDIGLLNEMFTSRSEPDNAKYSKDGVSWSGQGRRPD
AFKGLGAVELERYRIPQKK
NT seq
420 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaccacgaggagttctctacgctatcagcggctgaacgtagagagttaataatc
gcagagttaaagcgtaaaagccgcattcgcaccctgttgcgaggactcccgttagatgaa
gttcgggagatcattgacagaatgaagggcgttctcaatgaactggaggaagagtacaaa
aagcgagaagaagaagaaaaagaaaagcgagctcaggctgagcgaataatgagcgacatg
gaatcctgcggtgtggacatcggcttgctcaacgaaatgttcacgagcagatcagaacct
gataatgctaaatattcaaaagacggagtttcgtggagtgggcaaggacgtcgcccggat
gctttcaaggggttgggagctgtcgagctggagcgctaccgtatcccacagaagaagtaa
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integrated database retrieval system
