Eutrema salsugineum (saltwater cress): EUTSA_v10000016mg
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Entry
EUTSA_v10000016mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K05236
coatomer subunit alpha
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
eus04131
]
EUTSA_v10000016mg
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eus04147
]
EUTSA_v10000016mg
Membrane trafficking [BR:
eus04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
EUTSA_v10000016mg
Exosome [BR:
eus04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
EUTSA_v10000016mg
Exosomal proteins of bladder cancer cells
EUTSA_v10000016mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
TPR_COPA_B
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EML
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_SCAP
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR19_1st
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Fis1_TPR_C
GvpG
Beta-prop_IP5PC_F
Motif
Other DBs
NCBI-GeneID:
18022064
NCBI-ProteinID:
XP_006404585
UniProt:
V4LQJ7
LinkDB
All DBs
Position
Unknown
AA seq
1214 aa
AA seq
DB search
MLTKFETKSNRVKGLTFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFH
NSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGSLRKKTVSPADDLMR
FTQMNSDLFGGVDAIVKYVLEGHDRGVNWASFHPTLPLIVSGADDRQVKLWRMNETKAWE
VDTLRGHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGIQTFRREHDRFWILAVHP
EINLLAAGHDNGMIVFKLERERPAFALSGDSLFYAKDRFLRYYEYSTQKDSQVIPIRRPG
TPSLNQSPRTLSYSPTENAVLICSDLDGGSYELYIIPKDSVGRSDVVQDAKRGTGGSAVF
IARNRFAVLEKSTSQVLVKNLKNEVVKKSSLPIPTDAIFYAGTGNLLCRSEDKVVIFDLQ
QRLVLGELQTPFVRYVVWSNDMESVALLSKHTIIIASKKLVLQCTLHETIRVKSGAWDDN
GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAITINATEYV
FKLALLRKKYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVEDERIRFNLALESGNI
SVAVASATQINDKDLWYRLGVEALRQGNSGIVEFAYQQTKNFERLSFLYLITGNLDKLSK
LMKIAEVKNNVMGQFHNALYLGDVKERVKILENAGHLPLAYITASVHGLNDIAERLATEL
GDNVPSLPEGKTPSLLMPPSPVMCGGDWPLLRVMRGIFEGGLESAGRGGAVDEEEDVEGD
WGEELDMVDVDGMENRDIEALLNEEENDEEGGWGVLDDLELPPELDTPKASANARTSVFV
TPTQGMPVSQIWSQKSSLAAEQAAAGSFDTAMRLLHRQLGIKNFAPLKSMFLDLYSGSHS
YLRALSSSPVVPLAIERGWSESSSPNVRGPPALVFDFSQLEEKLKSGYKATTSGKFTEAL
RLFLSILHTIPLVVVESRREVDEVKELVTLVKEYVLGLKMELKRRETKDDPVRQQELAAY
FTHCNLQAPHLRLALLSAMGVCYKAKNLATAYNFAKRLLETNPVESQAKMARQVVQAAER
NMTDETKLNYDFRNPFVICGSTYVPIYRGQKDISCPYCTARFVPGQEGNICTVCDLAVIG
ADASGLLCSPSQVR
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccaagttcgagaccaaaagtaacagagttaagggcctgaccttccaccccaaa
agaccatggatcctcgccagtttgcacagtggtgtgatccagctctgggattatcgtatg
ggtactttgatcgatcgatttgacgagcacgaaggacctgttcgtggtgttcacttccac
aactcacagcctctattcgtctcgggaggtgatgattacaagattaaagtttggaactac
aaaacacacaggtgcctcttcactcttctcgggcatcttgattatatccgcactgtccaa
tttcaccacgaaaacccatggattgtgagtgctagtgacgatcagactatccgcatatgg
aactggcagtcacggacttgtatctctgtgttgactggtcacaatcattatgttatgtgt
gcttctttccatccaaaagaagaccttgtcgtatcagcatccttggatcagactgtccgt
gtctgggatattggttctcttaggaagaagacagtatctcctgctgatgacctcatgcga
tttactcagatgaactctgacctttttggtggggttgacgctatagttaagtatgtcctc
gaaggtcatgataggggagtaaactgggcttcttttcatcccacccttcccctcattgtc
tctggtgcagatgaccgccaagtaaagctgtggcgtatgaatgaaactaaagcttgggag
gtggatacactgcgaggccatatgaataacgtttcatcagttatgttccatgcaaaacag
gacataattgtatccaactctgaggataaaagcattcgtgtctgggatgctaccaagcga
actggaatccaaacttttcgccgtgaacacgatcgattctggattcttgcagttcaccct
gagattaatttactggcagcgggacatgacaacggcatgatcgtgttcaaacttgagaga
gaacgtcctgcatttgctttaagtggtgattctttgttctatgccaaggatagatttttg
aggtactatgaatattcaactcaaaaagattcccaagttatccccatacggcgccctggt
actccaagcttgaatcaaagtccgaggactctatcttacagtccgacggaaaatgcagtg
ttgatctgctcagatctggatggtggttcttacgagttgtacatcataccgaaagatagc
gttggcaggagtgacgttgtgcaagatgcaaagagggggacaggcggttctgcggtattc
attgcccgcaatcggtttgctgttcttgagaaaagcaccagccaggtgctagtcaagaat
ctaaagaatgaggtggttaaaaagagttctctgcctattcccacagatgctatcttctat
gctgggactggaaatttgctgtgtagatctgaggataaagtggttatatttgaccttcag
caaaggcttgttcttggtgaacttcagacaccgtttgttaggtacgttgtttggtctaat
gatatggagagtgttgcattgctcagcaaacatactatcattattgcgagcaaaaaactt
gtcctccagtgcacgcttcatgagacaatacgtgtgaaaagtggagcttgggacgacaat
ggtgtcttcatttacacaacgttgaatcatatcaagtactgccttccgaatggagatagt
ggaatcatccgaaccctggatgtcccaatctatatcaccaaggtttctggaaatacaatc
ttttgcttggatcgggatgggaaaaacagggctatcacaattaatgctactgagtacgtt
ttcaagcttgcactgctgagaaagaagtacgaccatgtcatgagcatgataagaaattcc
cagttgtgtgggcaggctatgattgcttacctgcagcagaaaggatttcctgaagttgcc
ctccactttgttgaagacgagaggatccgattcaacctggctcttgaaagtggcaacatc
agtgtagctgttgcatccgctacacagattaatgataaagacctctggtatagacttggg
gtggaggctcttcgccaaggtaattccggaattgttgagtttgcataccagcagacaaag
aactttgagaggttatcttttctttatctcattactggtaatttggacaagctttcaaag
ttgatgaagattgcggaagtgaagaacaacgtaatgggtcagtttcacaatgctctctac
ctaggagatgttaaagagcgtgttaagatactggagaatgctggtcatttgcctctagcc
tatatcacggcctcagttcacggtttaaatgacattgctgagcgactggcgactgagcta
ggagacaacgtgccctcattgcctgaagggaaaactccatcgcttctaatgccaccatcc
cccgtcatgtgtggtggtgattggcctcttctaagagtgatgagaggaatatttgaagga
gggcttgagagtgcaggcagaggaggggctgttgatgaagaggaagatgttgaaggcgat
tggggtgaggaactagacatggtcgatgttgatggaatggagaacagagacatcgaagcc
cttttgaatgaagaagaaaacgatgaagaaggtggatggggggtactcgatgacttggag
ctcccaccagagcttgacactcctaaggcctctgccaacgcacgtacatcggtctttgtg
acacctactcaaggtatgccagtaagtcagatctggagccagaaatcttctcttgctgct
gagcaggctgcagcgggaagctttgacactgcgatgcgtctgctccacagacagcttggc
attaagaactttgcgcctttgaaatcgatgtttcttgatctgtacagtggcagccatagc
tatctgcgtgctttgtcgtcatctcctgtggttccacttgccattgagcgcggatggagc
gagtcttccagtcccaacgttcgtggcccaccagctcttgtttttgatttctctcagctg
gaagagaagctgaaatctggctacaaagccacaacgagtggaaaattcactgaggctctc
cgtctcttcctctctatcctccacaccatccctctagtggtagtcgagtcaagaagagaa
gtcgatgaggttaaggaactggtcactctcgttaaagagtacgtccttggtctcaaaatg
gagcttaagagaagagagacgaaagatgatccggtgaggcagcaggagctcgctgcttac
ttcactcactgcaacctccaagcacctcacctacggctcgcgctgcttagtgcaatgggg
gtctgctacaaggcaaagaacctcgccactgcttataacttcgccaaaagactgttggaa
accaacccagtggagagccaggccaagatggctagacaagttgttcaagccgctgaacgc
aatatgacggatgaaaccaagctcaactacgacttcagaaacccgtttgtgatctgcggg
tcaacttatgtcccgatctacagaggacagaaagacatttcctgtccttactgcaccgcc
cggttcgtaccaggccaggaaggaaacatttgcacggtgtgtgatcttgcagtcattggt
gcagacgcatctggtttgctatgctctccgtctcaagtccggtga
DBGET
integrated database retrieval system
