Eutrema salsugineum (saltwater cress): EUTSA_v10000087mg
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Entry
EUTSA_v10000087mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K14515
EIN3-binding F-box protein
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus04016
MAPK signaling pathway - plant
eus04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
EUTSA_v10000087mg
04075 Plant hormone signal transduction
EUTSA_v10000087mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eus04121
]
EUTSA_v10000087mg
Ubiquitin system [BR:
eus04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
EUTSA_v10000087mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_6
LRR_4
F-box-like
F-box
LRR_At5g56370
LRR_RPS2
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
18022246
NCBI-ProteinID:
XP_006405190
UniProt:
V4M333
LinkDB
All DBs
Position
Unknown
AA seq
633 aa
AA seq
DB search
MSQIFSFAGENDFYRRGAIYPNPKEANLLLSLTSLVDCCYYPPCKRSRVVATAPSLFSAF
EAKPVSIDVLPDECLFEIFRRLPGPQERSACASVSKHWLTLVTSIKQNEIGADLSNKTED
GDDCEGCLSRSLDGKKATDVRLAAIAVGTAGRGGLGKLSIRGNDSTSKVSDLGLRSIGRS
CPSLKAVSLWNLSTITDNGLSEIAQGCPQLEKLDLSRCNTITNKGLVAIAKCCPNLSELT
LEACSRIGDEGLQAVARSCSKLKSVSIKNCPLVRDQGIAALLSNTTYSLAKLKLQMLNVT
DVSLAVVGHYGLSITDLVLSGLSHVSEKGFWVMGNGVGLQKLNSLTITACQGVTDTGLES
VGKGCPNMKKALVSKSPLLSDNGLVSFAKASLSLESLQIEECHRVTQFGFFGSLLNCGAK
LKAFSLVKCLGIRDLTTGLPASTHCSALRSLSVRNCPGFGDANLAALGKLCPKLEDIELY
GLKGITESGFLHLLQNSLVKVNFSGCSNLTDKVISAISARNGWTLEVLTVDGCNKITDAS
LVSIAENCQILSDLDLSKCSISDIGIQALASSDKLKLQILSMSGCSMVTDKSLPALVRLG
STLLGLNLQQCRSVSSSTVDFLVERLYKCDILS
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaaatctttagctttgctggtgagaatgatttttaccgtcgtggagcaatatac
ccaaatcccaaggaagctaaccttttgctctcgcttactagtctcgtggattgttgctat
taccctccttgcaagaggtctcgcgtcgtcgctaccgcaccgtctctcttcagtgctttc
gaggccaagccagtgtctattgatgtgctcccagatgagtgcctctttgagattttcagg
cgtttacctggaccgcaagagaggagcgcttgcgcttccgtctcgaaacactggctcaca
cttgtgactagcatcaagcaaaacgagatcggtgctgatctttcaaacaaaaccgaagat
ggtgatgattgtgaaggatgcttatctaggagcttagatgggaagaaggcaactgatgtt
agactagctgcgatcgctgtcggaacagctggtcgcggtggacttgggaaactgtctatc
cgaggaaacgattccactagcaaggtttcggatcttggtcttagatcgattggtaggagc
tgcccttctcttaaggctgtttccttgtggaacctttctaccattactgacaatggtctc
tcggagattgctcaaggttgtcctcagcttgagaagcttgacctgagccgttgcaataca
atcacgaacaagggtttggtagcgattgctaagtgctgtcctaacttgagtgagctgaca
ttggaggcttgttcgagaatcggagacgagggtctgcaagccgttgcaagatcctgctcc
aagctgaagtcggtgtctatcaagaactgtcctcttgtcagggatcaaggaatcgccgca
ttactgtctaacaccacctattccttggctaagcttaagcttcagatgctgaatgtcact
gatgtgtctcttgctgttgtgggtcattacggcttgtctatcactgatcttgtgctgtct
ggactgtcacacgtgagcgagaaaggattctgggttatgggaaatggcgttgggctccag
aagttaaactctttaaccatcacagcttgccagggcgttactgacacggggcttgaatct
gtggggaagggatgtccgaatatgaaaaaggcgttggtcagtaaatctccattgttgtcc
gacaacggtttggtctcatttgcaaaagcttctttgtcattggagagtcttcagattgaa
gagtgccacagggtcacccaatttgggttttttggttctcttttgaactgtggtgcaaag
ctgaaggctttctctctggtgaagtgtttgggtattagagatctcaccacgggattgcct
gcttcaactcactgcagcgctctccgctctctgtctgtacgtaattgtcctggctttggt
gatgcaaatcttgcagcccttgggaagctgtgccctaagctcgaggatattgagctctac
gggctcaaggggataacggagtctggttttctacatcttcttcagaactctcttgtgaag
gtgaacttcagtggttgttctaatttgacagacaaagtgatctctgccatctctgctcgt
aacggttggactcttgaagtcttgaccgtcgatggatgtaacaagatcaccgacgctagc
ctggtctccattgcagaaaactgccagattctcagtgatttggatctttcgaaatgctca
atctcagatattgggattcaagctttggcttcctctgacaagctgaaacttcagatccta
tccatgtcaggttgctctatggtcacagacaagagcttgccagccttagtgaggttaggt
tcaactttgttgggattaaatcttcaacagtgtcggtctgtgtccagttccactgtcgac
ttcttggtcgagcggctttacaaatgcgacatcctctcctga
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