Eutrema salsugineum (saltwater cress): EUTSA_v10000282mg
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Entry
EUTSA_v10000282mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K10739
replication factor A2
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03030
DNA replication
eus03420
Nucleotide excision repair
eus03430
Mismatch repair
eus03440
Homologous recombination
eus03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EUTSA_v10000282mg
03420 Nucleotide excision repair
EUTSA_v10000282mg
03430 Mismatch repair
EUTSA_v10000282mg
03440 Homologous recombination
EUTSA_v10000282mg
03460 Fanconi anemia pathway
EUTSA_v10000282mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eus03032
]
EUTSA_v10000282mg
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10000282mg
DNA replication proteins [BR:
eus03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
EUTSA_v10000282mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
EUTSA_v10000282mg
MMR (mismatch excision repair)
EUTSA_v10000282mg
DSBR (double strand breaks repair)
HR (homologous recombination)
EUTSA_v10000282mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
TrmB
Rrf2
RMI2
PCI
HTH_25
MarR
B-block_TFIIIC
HTH_IclR
Motif
Other DBs
NCBI-GeneID:
18022346
NCBI-ProteinID:
XP_006404980
UniProt:
V4M2H0
LinkDB
All DBs
Position
Unknown
AA seq
278 aa
AA seq
DB search
MFSNSQFEPNSAFSGGGFMSSQPSQAYETSSSTAKSRDFQGLVPVTVKQIAEASQSGGEK
SGIVINGIELTNVSLVGLVCDKDVSKVTEVRFTLDDGTGRIDCKRWVNESFDAREMESVL
DGAYVRLNGHLKTFQGKKQLLVFSVRPITDFNEVTFHYIECIHFYSKNSESQLGQQVGDV
TQSHMVNSSVTTNQTTTLNPVMSSQNNDGNGRKNLDDMILDYLKQPACTERQQGIHLDEI
AQQLKIPKNKLEGVIQSLEGDGLIYSTIDEYHFKHVEL
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgttctccaacagtcaattcgagccgaattccgctttctccggcggcggattcatgtct
tctcagccttctcaggcctatgaaacttcttcatccactgctaagagtcgtgactttcag
ggtcttgtccctgtgacggtgaagcaaatagccgaagcttctcagtccggtggcgaaaaa
tctgggatcgtcatcaatggaatcgaactaacaaacgtctctcttgttgggttagtgtgt
gacaaagatgtctcaaaagtcacagaagttagattcactcttgatgatggaacaggtcga
atcgactgtaaaagatgggtgaatgaaagtttcgacgctagagaaatggagtcagtgcta
gacggagcctatgtgcgtctcaatggccatttgaagacttttcaggggaaaaagcagcta
cttgttttctccgtgaggcctattacagacttcaacgaggttacctttcactatattgag
tgtatacatttctattccaagaactctgaatcacagttgggacagcaagttggtgatgtc
actcaatctcacatggttaactcatcggttaccactaaccagacaaccacattgaaccct
gtaatgtcctctcaaaacaacgatggaaatggtcgcaagaacttggatgatatgattcta
gactatctaaagcaacctgcttgcactgagagacaacaagggatacacttggatgaaatt
gcccagcaattgaagatcccaaagaacaagctcgaaggtgttattcagtcactggaaggc
gatggtcttatatactcgacaatcgatgaatatcatttcaagcatgtcgagctttga
DBGET
integrated database retrieval system
