Eutrema salsugineum (saltwater cress): EUTSA_v10000577mg
Help
Entry
EUTSA_v10000577mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
EUTSA_v10000577mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10000577mg
03009 Ribosome biogenesis [BR:
eus03009
]
EUTSA_v10000577mg
04131 Membrane trafficking [BR:
eus04131
]
EUTSA_v10000577mg
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
eus04147
]
EUTSA_v10000577mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
EUTSA_v10000577mg
Ribosome biogenesis [BR:
eus03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
EUTSA_v10000577mg
Membrane trafficking [BR:
eus04131
]
SNARE
SNARE associated proteins
Others
EUTSA_v10000577mg
Autophagy
Aggrephagy
Other aggrephagy associated proteins
EUTSA_v10000577mg
Exosome [BR:
eus04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EUTSA_v10000577mg
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_2
AAA_16
CDC48_2
AAA_5
AAA_14
AAA_22
AAA_33
TIP49
NPHP3_N
RNA_helicase
AAA_17
nSTAND3
Mg_chelatase
AAA_28
ATPase_2
Parvo_NS1
nSTAND_NTPase5
AAA_18
Viral_helicase1
ABC_tran
AAA_7
NB-ARC
NACHT
TsaE
Vps4_C
AAA_lid_PRS2_C
DUF815
IstB_IS21
Zeta_toxin
ResIII
AAA_24
Motif
Other DBs
NCBI-GeneID:
18022175
NCBI-ProteinID:
XP_006405119
UniProt:
V4LVQ9
LinkDB
All DBs
Position
Unknown
AA seq
808 aa
AA seq
DB search
MSNQTESSDSKPSKKDLSTAILEKKKSPNRLVVDEAINDDNSLVSLHPSTMEKLNFFNGD
TILIKGKKRKDTVCIALSDESCEEPKIRMNKVVRSSLRVRLGDVVSVNQCPDIKYGKRVH
ILPVDDTIQGVTGNLFDAYLKPYFLGTYRPVRKGDLFLVRGGMRSVEFKVIEIDPPGEYC
VVAPDTEIFCEGEPIKREEEERLDEIGYDDVGGVRKQMAQIRELVELPLRHPQLFKTIGV
KPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKMAGKSESNLRNAFEEAEK
NAPSIIFIDEIDSIAPKRDKTNGEIEKRIVSQLLTLMDGLKSRAHVIVMGATNRPNSIDP
ALRRFGRFDREIDIGVPDETGRLEVVRIHTKNMKLAEDVDLERISKNTHGYVGADLAALC
TEAALQCIREKMDVIDLEDDSIDAEILNSMAVTNEHFNTALGNSNPSALRETVVEVPNVS
WEDIGGLENVKRELQETVQYPVEHPEKFEKFGMSPSKGVLFYGPPGCGKTLLAKAIANEC
QANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIATQRGSSVGDAGG
AADRVLNQLLTEMDGMNAKKTVFIIGATNRPDIIDPALLRPGRLDQLIYIPLPDEDSRLN
IFKSCLRKSPVSKDVDLTVLAKYTRGFSGADITEICQRACKYAIRENIENDIEKQRRSRD
GLEAMEEDEVAEIRGAHFEESMKFARRSVSDADIRKYQAFAQTLQQSRGFGTEFRFDPST
GTGRTTGGAATDPFAISAAAANDDDLYS
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaccaaactgaatcttccgactccaaaccatcgaagaaagatctcagcacagct
attcttgagaagaagaagtcaccaaaccggctcgttgtagacgaagccatcaacgatgac
aactctctcgtctctctccacccttccaccatggaaaagctcaattttttcaatggcgat
acgattctcatcaagggcaagaaaaggaaagacacagtctgcattgctctttccgatgaa
tcatgtgaggaaccaaagatcagaatgaacaaagtcgtaaggtccagcttaagggttaga
ctcggagacgttgtctctgttaaccaatgtccagacatcaagtatggaaaacgtgtccac
atcttgccggttgatgataccatacaaggtgttaccggaaacctcttcgacgcttactta
aaaccttacttcctcgggacttaccgtccggtgaggaaaggtgatctgttcctagtgaga
ggaggaatgagaagtgtggagtttaaagtcatcgagattgatcctcctggtgagtattgt
gtggtggctccagatacagagattttctgtgaaggtgaaccaataaagagagaagaagaa
gaaaggcttgatgaaatcggttatgatgatgttggtggagtcaggaaacagatggctcag
attagagagcttgttgagcttcctttgagacatccacaactgttcaagaccatcggtgta
aagccaccaaagggtatcttgctttatggacctcccgggtcaggaaagactttgattgcc
cgtgcggtggctaacgagacaggagcgtttttcttctgtattaacggaccagagatcatg
tctaagatggctggtaagagtgagagcaatttaaggaatgcatttgaggaggcagagaag
aacgctccttctattatattcattgatgagattgactctattgcaccaaagagagacaag
actaatggagagattgagaaaaggattgtctctcagcttctcacgcttatggacgggttg
aaatctcgtgcacatgttatcgtcatgggagctacgaaccggcccaatagtatcgacccg
gctttgagaaggtttgggagattcgacagggagattgatattggtgtccctgatgaaacc
ggacgtcttgaagttgttaggatccataccaagaacatgaagctagctgaagatgtggat
cttgaaagaatctccaagaacacacatggatacgttggtgctgatcttgcagctctatgc
actgaagctgctcttcaatgtataagagagaagatggatgtgattgacttggaagatgac
tctatcgacgctgagattctcaactccatggctgtgactaatgaacacttcaacactgct
cttggaaacagcaacccatccgcgcttcgtgaaaccgttgtggaggttccaaatgtgtca
tgggaggatattggaggtcttgagaatgttaaaagagagctacaagagactgttcaatac
cctgtggagcatcccgagaagtttgaaaaattcggtatgtctccatcaaagggagttctt
ttctacggtccacctggttgtggaaaaacccttttagccaaagctatagccaacgagtgc
caagcaaacttcatcagcgtcaagggacctgagctactcacgatgtggtttggagaaagc
gaggctaacgtcagagaaatcttcgacaaagctcgtcagtccgcgccttgtgttctgttc
tttgacgagctagactccattgcaactcagagaggaagcagtgttggcgacgcaggaggt
gcagcggatagagtcttgaatcagctcttgacggagatggatggtatgaatgcgaagaag
acggtgtttatcatcggagcaactaacagacctgacattattgatccagctctgcttcga
ccaggaagactagaccagctaatctacattcctttacctgatgaagattctcgtctcaac
atcttcaagtcttgcttgaggaagtctcctgtttctaaagacgtggacttgaccgtgcta
gctaagtacactcgtggattcagtggtgcggatatcactgagatttgccagagagcttgc
aagtacgccattagagagaacatcgagaatgatattgagaagcagcgtagaagtagagat
ggtctagaggccatggaggaagatgaagttgcggagattagaggtgctcatttcgaagag
tcgatgaagtttgcaaggaggagtgtgagtgatgctgatataagaaagtatcaagctttt
gctcagacgctgcaacagtcaagagggtttggaactgagttcagatttgacccaagcacg
ggtactggacggaccactggtggtgcagccactgatccctttgcaatttctgcagctgct
gccaatgacgacgatctttacagttag
DBGET
integrated database retrieval system
