Eutrema salsugineum (saltwater cress): EUTSA_v10000697mg
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Entry
EUTSA_v10000697mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
EUTSA_v10000697mg
Enzymes [BR:
eus01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
EUTSA_v10000697mg
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Paralog
GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
CarboxypepD_reg
RhgB_N
CarbopepD_reg_2
Motif
Other DBs
NCBI-GeneID:
18021821
NCBI-ProteinID:
XP_006404724
UniProt:
V4LUK7
LinkDB
All DBs
Position
Unknown
AA seq
642 aa
AA seq
DB search
NKLNITKPGQTIPAPIVQLRKVSHDKVVVDNGIIQVTFSSPQGLITGIKYNGIDNVLDDE
IDDRGYWDVVWYEPGKKGETDKLEGTKFEIITQNEEQVEISFTRTWTISKRGSLAPLNVD
KRYIIRSGVSGIYMYGILERLEGWPDVDMDQIRIVFKLNPKKFDFMAISDDRQRSMPSMA
DRNNAKELAYKEAVLLTNPSNPMFKGEVDDKYMYSMEDKDNNVHGWISSDPPVGFWMITP
SDEFRLGGPIKQDLTSHAGPITLSMFTSTHYAGKEMRMDYRNGEPWKKVFGPVFAYLNSV
SPKDSTLRLWRDAKRQMAAEVKSWPYEFVKSEDYPLSHQRGTIQGQFYIKDSYVSRLRIY
GKFAFVGLAPIGEAGSWQTESKGYQFWTKADRKGRFIIENVRAGNYSLYAWGFGFIGDYK
YEQNITITPGSKMNVGQIVYEPPRNGPTLWEIGVPDRTAGEFYIPDPYPTLMNKLYVNPL
QDRFRQYGLWDRYADLYPQNDLVYTIGVSDYRRDWFFAHVTRNVGNNTYQATTWQIIFNL
KNVNRVRLYTLRIALASAADSELQVRINNPKSDHIFTTGYIGKDNAIARHGIHGLYRLYS
IDVGGNLLSVGDNTIYLTQTRSLGPFQGVMYDYIRLEGPSRT
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
aacaaacttaacatcacaaagcctggccaaaccataccagccccaatagttcagctaaga
aaagttagtcatgataaggtggtagttgataatggtattatccaagtaactttctcgagc
ccacaaggtttgataactggaataaaatacaatggcatcgataacgtattggacgacgaa
attgacgatcgtgggtattgggacgtagtctggtatgagccgggaaagaaaggtgaaact
gataaattagaaggaaccaaatttgaaatcataactcagaacgaagaacaagttgaaatt
tcatttaccaggacgtggacgatctccaaacgtggctccttggcacctctaaacgtagat
aaaaggtacattattagaagtggtgtctcgggaatatacatgtacggtatattggagagg
ttggaaggttggccagacgtggacatggaccaaattagaatcgtcttcaagctcaacccc
aaaaaatttgatttcatggccatatctgatgatcggcagagaagcatgccatcgatggca
gataggaacaatgctaaggaattagcttacaaagaagctgttcttttgacaaatccaagc
aaccctatgttcaaaggagaggtagacgataagtatatgtactcaatggaagacaaagac
aacaacgttcatggttggatctcgtcggacccaccggttgggttttggatgatcactcca
agcgatgagttccgtcttggtgggcccatcaagcaagacctcacctctcacgcgggtccc
atcaccctctccatgtttacgagcacgcattacgcggggaaagagatgagaatggattat
cgaaatggagaaccatggaagaaggtttttggacctgtctttgcttatctcaactctgtc
tctcccaaagactccactcttcgtctctggagagatgccaaacgacagatggctgcagag
gtcaaaagctggccttatgagtttgttaaatcagaagactatcctctttctcatcaaaga
ggaacaatccaaggtcaattctacatcaaagacagttacgtatcaaggttaagaatatat
ggaaaatttgcttttgttggtttggcaccaattggtgaagctggttcgtggcaaacagaa
tccaaggggtatcaattttggacgaaagctgacagaaaagggagattcataatagagaat
gtgagggcaggcaattatagtctctacgcatggggttttggttttatcggtgactataaa
tatgagcaaaacatcaccatcacgccaggtagcaagatgaatgtagggcaaatagtgtat
gaaccgccgagaaacggtccaacgttgtgggaaattggtgtaccggatcgaaccgccgga
gaattctatataccggatccttaccctacacttatgaataagctctatgttaacccactt
caagacagatttaggcaatatggattatgggatcgttatgcagatttataccctcaaaac
gatcttgtctacacaatcggtgtaagtgattatagaagagattggttttttgcacatgtc
accagaaacgtaggaaacaatacataccaagcgacaacatggcaaatcatatttaacctc
aaaaacgtgaaccgtgtcagactctacacactccgaatagctctagcctcagctgctgat
tccgaattacaagttcgtattaacaatccaaaatccgatcatattttcacgaccggatat
atcggaaaagacaatgcgattgcgagacatgggattcatgggttatatagactgtatagt
atcgatgttggtggaaatttactaagtgttggtgataatacgatatatttaactcaaacg
agaagtctaggaccgtttcaaggtgttatgtatgattatattcgtcttgaaggtccttcc
agaacttga
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