Eutrema salsugineum (saltwater cress): EUTSA_v10000739mg
Help
Entry
EUTSA_v10000739mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K11267
sister chromatid cohesion protein PDS5
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10000739mg
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10000739mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
EUTSA_v10000739mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
EUTSA_v10000739mg
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PTM_DIR17_Tudor
TPR_DNAAF5
Rad9_Rad53_bind
LBR_tudor
Motif
Other DBs
NCBI-GeneID:
18016171
NCBI-ProteinID:
XP_006398468
UniProt:
V4N3P7
LinkDB
All DBs
Position
Unknown
AA seq
1627 aa
AA seq
DB search
MAQKPEEQLKEFGSKLDPPPASKDSLLKLFKEAAVCLSELEQSPAAAVLKSIQPFLDAVI
KPEILKHQDKDVKLLVASCVSEITRITAPEAPYSDNIMKDIFELIVSAFSGLNDVGGPSF
ARRVVILETVAKYRSCVVMLDLECDDLVKEVFTTFLDVARDDHPEVVFSSMQNIMIVLLE
ESEDVQEHLLLILLSKLGRNRSDVKDAARRLAMKVIEQCAPKVESDIKQFLISSMSGENR
YSSSQIDYHEVIYDLYRCAPQALSGVAPYLTGELLADKLETRLKVVGLVGDLFSLPGRVI
SEEFSSIFLEFLKRLTDRIVEVRMVILDHIKNCLLSDPSRAEASQITSALRDRLLDYDEN
IRKQVVAVICDVAVSAPTSIPIDTIKLVAERLRDKAILVKTYTMERLTELFRVYCLWYAE
GKVGTGDFDWIPGKILRCLYDKDFRSDTIEHILCSSLFPSDFSVRDKVKLWIGIFSGFDN
VETKAFEKIMEQRQRIQQEMQRYLSFKQMQQSADVPEMQKKILFGFRVMSRAFSDPPKTE
QNFLVLDQLKDANIWKILNNLLDPNTSIIQASKIRDDMLKILSEKHCLYEFLGTLSIKCS
NLLFSKEYVKEILSEVSVRKSSKNILGIQSCMDFLGVLASFCPSLFDGAEEELIGFLKDD
DEMIKEGTLKILARAGGTIRENLIVLASSVDLLLERICVEGNRKQAKYAVHALASITKDD
GLKSLSVLYKGLVDMLEDKRHQPAVLQSLGCIAQIAMPVFETRETEVVEFIKSKILKRES
EAVDDKNLSWDDKSEICQLKIYGIKTLVKSYLPFKDAHLRTGVDDLLGLLRNILSFGEVS
EDLESSSVDKAHLELAAAKAVLRLSRHWDDKIPIDIFHLTLKTPEISFPKAKKIFLGKVH
QYVKDRVLDTKYACSFLFDITGSKVLVSEEEKQNLADIIQHSYQTKVRKVSAQTDAKSVS
LYPHHILPYLVHALAHHSCPDVEKCKDVKEYEIIYRQLYLISSMLLHKEEDGKAEDIDKD
HECVPTIISIFHSIKQSEDVTDATKSKNSHAICELGLSVINHLTQKEPDLLGAFTPVSLP
PTLYKPSEKNEGDKSQVGEEKLWLADETVLAHFRSLKMDSHADSSVIPQTSENEGMNDEE
SDGNEIPLGKIVARLRAQVTKSKKGKKNKSVPAEDDENGKNEVDVLKMVREINLDHLMLD
KFASSNGHKHTPGERPDTCQADQKANKRSSGDLTSVVAVPKRRRSSSGHSPFKFSNSGPR
PLKASKEELPEERDMDTNVSSDSNDEDSNRGRRLERNSSRKKKKSFSSKSKNTESDWGLT
DLENQKEDGNYSERSRSAESGDRMKSTSGSIKNRKRKGITGLAKCSTTEKKLATDELIGC
RIEVWWPMDKRFYEGTVKSYDSTKQKHVILYEDGDVEVLRLDKERWELIETGGKPTKKAN
TSKRSSSKKGSSEKKHKNSDGFQRDEDPIATTPKGKRTPKIYLKHKHQEGTPRSLSLEDE
KLERGNKKKRSSAIPVGEVAEKTKEKKMESTTEQMTEDPEYGREAGEDKSESEGKTWKEG
EDDVEAKAESSGDPEGKETDVDNSDSEGKQENNDMETEAEGDAEASDNETLGAWRSKVVK
SSSRKAA
NT seq
4884 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaaagccagaggagcagttgaaggagttcggatccaagcttgacccacctcct
gcgtccaaagattcattgctcaaactctttaaggaagctgctgtttgtctttctgagttg
gagcagtctccagcagcagcagtgctgaagtctattcagccttttcttgatgcagttatt
aaacctgaaattctcaagcatcaagacaaggatgtcaagcttctagttgcaagttgcgtt
tctgagataactcgtataacagcacctgaagcgccctacagtgataatattatgaaggat
atttttgaactgattgtgagcgctttttctgggttgaatgatgtcggtggaccatcattt
gcaagaagggttgtgattttagaaacggttgcaaagtacaggtcatgtgtagtgatgttg
gatcttgaatgcgatgatctggtgaaagaagtctttactacatttcttgacgttgctaga
gatgaccatccggaggttgttttctcatcaatgcaaaatataatgattgttctcttagaa
gagagtgaagatgtgcaggagcatctgttactaatcttactctctaaattgggcagaaat
agaagtgacgttaaagatgctgcaagaagacttgctatgaaagtcatagagcagtgtgcg
ccaaaagttgaatctgacataaagcagttccttatctcttcaatgtctggagagaatcga
tattccagcagccaaatcgactaccatgaggttatctatgatttgtaccgctgtgctcct
caggccctatccggagttgcaccatatctcactggagaacttttggctgataaattggaa
actcgtttgaaagtggttggattggttggagatttgttttccctgcctggacgtgtcatc
tccgaagagttcagttcaatcttcttggagtttctgaaaaggctgactgatagaatagtt
gaagttagaatggtcatcctggaccacattaagaactgtttgctctcagatccttcgaga
gctgaggcttctcaaattacatctgcccttcgtgaccgactcttggattatgatgagaat
atccgcaaacaagttgttgctgttatttgtgatgtggctgtgagtgcaccgacgtcgatt
ccaattgacaccataaagttagttgctgaacggcttcgagacaaagctatactcgtaaaa
acatacacaatggaaaggttgactgaattgttccgggtatattgcttatggtatgctgaa
gggaaggtaggcactggcgactttgattggattcctggaaaaattttgagatgtctctat
gacaaagatttcagatcagatacaattgaacatattctatgcagttcattgtttccaagt
gatttctctgttagagataaagttaagctttggataggaatcttttccgggtttgacaac
gtggagacaaaagcttttgagaaaataatggagcaaagacaaaggatacaacaagaaatg
caaagatatttgtcattcaaacagatgcaacagagtgctgatgttcctgagatgcagaaa
aagattctatttggattcagagttatgtcacgtgcattttctgatcccccaaaaactgag
cagaactttttagttcttgatcaactgaaagacgctaatatctggaagattttgaataat
ctgctcgatcccaacactagcataatacaagcgtccaagattcgggatgatatgcttaaa
atactttctgaaaagcattgtctctatgaatttctcggcactctctccataaagtgttct
aatctgctattcagcaaggaatatgtgaaagagatattatcggaagtctctgttagaaag
tcttctaaaaatatcttgggcattcaatcttgcatggacttcttaggggttctcgcaagt
ttctgtccatcattgtttgatggggctgaagaagagctgataggtttccttaaagatgat
gatgagatgataaaagaaggtactctaaaaattctggcaagggcaggaggtactattcgg
gagaatctcattgttttagcgagttctgtggacctgttactggagaggatctgcgtagaa
ggtaaccgtaagcaggctaagtatgctgtgcatgcactagcatcaataacaaaggatgat
ggcttgaagtcgctctctgttttatacaagggactcgtggacatgctggaggacaagaga
catcagccagctgttcttcagagccttggatgcatagcgcagattgcgatgccggtcttt
gagactagagaaaccgaagttgttgagttcattaaaagcaaaatcctcaaacgggaaagt
gaagctgtagatgataaaaatttatcctgggatgacaaaagtgaaatttgtcaactaaag
atatatgggatcaagacgttggtgaagagctacttgcctttcaaggatgctcatcttcgt
accggtgttgatgaccttcttggattactgagaaacattctttcctttggggaagtatct
gaagatctagaatcaagttctgttgacaaggctcatttggaacttgctgcggcaaaggca
gtcctccgcctttctaggcactgggatgataagataccgattgatattttccatttaaca
ctaaaaacccctgagatatcatttcctaaggctaagaaaatattccttgggaaagttcac
cagtatgtaaaggatagggttttggacacaaagtatgcctgttcattcttatttgatatc
actggatcaaaagttcttgtatcagaggaggagaaacagaacctagctgatatcattcaa
cattcttaccaaacaaaagtgcggaaagtctctgctcagactgatgcaaaatcagtgtct
ctctaccctcatcatatccttccttatctggttcacgcacttgcgcatcattcttgccct
gacgttgaaaaatgcaaagatgtgaaggaatatgaaatcatatatcgacaattatacttg
atcagttctatgttactccataaagaggaagacgggaaggctgaagatattgacaaggat
catgagtgcgttcccaccattatatcgatcttccatagtataaaacagtcagaagatgtc
actgatgcgacaaagtcaaagaattcacatgcaatctgtgagcttggactatcagtaatc
aatcacttaactcagaaagagcctgatctactaggggcattcacgcctgtatcgctgccc
ccaacgctgtacaaaccttctgaaaaaaatgaaggtgacaagtctcaggttggtgaagag
aaattgtggctagctgatgaaactgtcttggcacacttcagatctctcaagatggatagt
catgctgattcatctgtgataccccaaacgtcagagaatgagggaatgaatgatgaggaa
agtgatgggaatgaaattcctctgggtaaaattgtagcgcgtttaagagctcaggtaacc
aagagtaagaagggaaaaaagaataaatctgttccagctgaagatgatgagaatggtaaa
aatgaggtcgacgttttgaaaatggtgagggagataaatctggatcacttaatgctggat
aaatttgcatccagtaatggacacaaacatacccctggcgagagaccagacacatgtcaa
gcggatcagaaagctaacaaaaggagttctggtgatctaacatcagttgttgcagtccct
aaacgccggagatcatcttctggccatagtcctttcaagttctcaaatagtggtcctaga
ccactgaaagcgtctaaagaagaattgcctgaagagagagatatggacacaaatgtctcc
tcggactcgaacgatgaagattcaaaccggggaagaagattagaaaggaactcttcccgg
aagaaaaagaaaagcttctcatcaaaatcaaagaacacagaatctgattggggtctcact
gatttggaaaatcaaaaagaagatggcaactacagtgagaggagtaggtcagcagaaagt
ggtgatagaatgaagtctacctctggatcaataaagaaccggaaaagaaaaggcatcaca
ggactggctaagtgttctacaacagaaaagaaacttgctactgatgaactaatcggttgc
agaatagaagtttggtggcctatggataaacggttttatgaaggcacagtaaaatcttat
gattcaacaaaacagaaacatgtgatactttatgaggatggagatgtcgaagtacttcgt
ctagataaagaacggtgggagctcatagaaacgggtggaaaacccacaaagaaggccaat
acatcaaagcggagttctagtaagaaagggtcttcggaaaagaagcataagaattcagat
ggctttcaaagagatgaggaccctattgctactacgccaaaaggaaaaagaactccaaag
atttacctaaaacataaacaccaggaaggcacaccaagaagtctctctttagaagatgag
aaactagagagaggaaacaagaaaaaacgatcttctgccattccagttggtgaagttgct
gaaaaaacaaaagaaaagaaaatggaatcaaccacagaacagatgaccgaggatccggaa
tatggtagggaggctggcgaagataaatcagagtccgaaggaaagacgtggaaagaaggc
gaggatgatgtggaggcaaaagcagagtcgagtggggaccctgaggggaaagaaactgat
gttgacaactcagattctgaggggaaacaagaaaacaatgatatggagacagaagctgaa
ggggatgctgaggcttctgacaatgagactcttggagcgtggagaagtaaagtggtcaag
tcaagctcgaggaaagcagcatag
DBGET
integrated database retrieval system
