Eutrema salsugineum (saltwater cress): EUTSA_v10000781mg
Help
Entry
EUTSA_v10000781mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K07466
replication factor A1
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03030
DNA replication
eus03420
Nucleotide excision repair
eus03430
Mismatch repair
eus03440
Homologous recombination
eus03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EUTSA_v10000781mg
03420 Nucleotide excision repair
EUTSA_v10000781mg
03430 Mismatch repair
EUTSA_v10000781mg
03440 Homologous recombination
EUTSA_v10000781mg
03460 Fanconi anemia pathway
EUTSA_v10000781mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eus03000
]
EUTSA_v10000781mg
03032 DNA replication proteins [BR:
eus03032
]
EUTSA_v10000781mg
03400 DNA repair and recombination proteins [BR:
eus03400
]
EUTSA_v10000781mg
Transcription factors [BR:
eus03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
EUTSA_v10000781mg
DNA replication proteins [BR:
eus03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
EUTSA_v10000781mg
DNA repair and recombination proteins [BR:
eus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
EUTSA_v10000781mg
MMR (mismatch excision repair)
EUTSA_v10000781mg
DSBR (double strand breaks repair)
HR (homologous recombination)
EUTSA_v10000781mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
RADX
DUF223
BRCA-2_OB1
CDC24_OB3
Fer4_10
Fer4_9
DUF936
Motif
Other DBs
NCBI-GeneID:
18016095
NCBI-ProteinID:
XP_006398214
UniProt:
V4LBA9
LinkDB
All DBs
Position
Unknown
AA seq
799 aa
AA seq
DB search
MAANLTAGAVAKMLNGAVSSEAEMVPILQVTDLKLIQSKLKQSRQNQDLSQERYKLSLSD
GYKTQEGMLNTNMNTLVNQGTIQVGSILRLTRFVCNLIQHRRIVMVLELDIIAEKCHIIG
NPAQTLTPIAQPVGNPEQQQARRSELNGVRQVNDSSAARFGVANPPQPHVPETSLSTLPY
VSSTSGYGSSRQEQIRPPQAASSRPVQPSYKPQQQPQQPSMYVNRGPVARNEAPARIIPI
SALNPYQGRWTIKVRVTSKGELRRFNGPRGDGKVFSFDLVDADGGEIRVTCFNDVVDQFF
DVIVVGNVYLISKGSLKPARKEYNHLPNDYEIHLDNASTIQQCHEDDAAIPRNQFHFRNI
SDIENMENNGITDLIGIVSSISPTGSIMRKNGTEAQKRALQLKDMSGRSVEVTMWGNFCN
AEGQKLQNLCDSGVFPVLAVKAGRISEFNGKQVSTIGSSQLFIEPDLPEARELREWYERE
GRNAPCTSISREFSGSGREEVRKVITQIKDEKLGTSEKPDWITVSGTISFMKVDNFCYTA
CPIMNGDRPCSKKVTNNGDGTWRCERCDRCVDECDYRYILQLQLQDHTGITWATAFQEAG
EEIMGMPAKDLYYMKYEDRDEDKFEDIIRKAAFTKYIFKLKIKEETYSDEQRVKATVVKA
EKVNYSSDTRFLLDAINKLRTEDANPLPINQVTSSHGSGAFNSGIGTSGTRETSSVDVPR
REIRLPAANQVSQFGNEHTSGSRPLGGITYCNACGGNGHAADNCPSFMSEPQGQHTSSAY
RSTPGGYAAGGMPRQHVRS
NT seq
2400 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaatttgacggcgggagcggttgcgaagatgttgaacggagcagtgtcgagc
gaggcagaaatggtgccgattctgcaggtgacggacttgaagctgattcagagcaagctt
aaacaatcacggcaaaaccaggacttgagtcaggagagatataagctctcgttatccgat
ggttacaaaacgcaagaaggaatgcttaatactaacatgaacaccctcgtgaatcaaggg
actattcaagttgggtcgattttgagactcacacgtttcgtctgcaacctcattcagcat
cgaaggattgttatggttttggaactagacattattgcggagaaatgccatataatcgga
aatcctgcacaaacgttgacgcctattgcacaacccgttggtaatcctgagcagcaacaa
gctagaaggagtgaattgaatggtgttcgtcaagttaacgattcttcagcagcgagattt
ggtgtagccaatccacctcaacctcatgttcctgaaacatcactttccactctaccatat
gtgagctcaacttcaggttatggaagctctaggcaggagcaaatcaggcctcctcaagca
gcttcttctcgtccagttcagccgagttataagcctcaacaacagcctcaacaaccatcg
atgtatgttaacaggggaccagtggctagaaacgaagctcctgcgaggataataccaatc
tctgctcttaacccttaccagggtcggtggaccatcaaggtcagggtcacgagtaaggga
gaacttaggcgttttaatggtcctcgtggggatgggaaggtgttcagtttcgatctagtt
gatgctgatggtggagaaattcgggtgacttgtttcaatgatgtggttgatcagttcttt
gacgtgattgtagttggtaatgtttatctgatctcaaaggggagtttgaaacctgctcgg
aaggagtataatcatcttcccaatgattacgaaatacatttagacaatgcgtcaacgata
cagcagtgccacgaggatgatgctgccattccacgcaatcagttccatttccgtaacata
agtgatattgagaacatggagaacaatggtatcactgatctaattggtattgtgtcgtcc
atcagtccaacggggtcgattatgcggaagaatggaactgaggcacagaagagggcactt
cagttgaaagatatgtctggtcgaagtgttgaggtaaccatgtggggtaatttctgcaac
gcagaaggacagaagctgcagaatctttgtgattctggggtgttcccggttcttgctgtc
aaggcgggtaggatcagtgagtttaatgggaagcaagtgagcaccattggatcaagtcag
ttattcatagagccagatctccctgaagccagagaattgagggaatggtatgagcgagaa
ggacggaatgctccttgtacctcaatatctagagagttttccggctctggcagagaagag
gttcgcaaggtgatcactcagatcaaggacgagaagctagggacttcagagaagccggac
tggatcacagtgagtggcaccatttcattcatgaaggttgacaatttctgctacacagct
tgtcctatcatgaatggagatcgtccatgcagcaaaaaagtgaccaataacggagatggg
acttggcggtgcgagaggtgtgaccgatgtgtggatgaatgtgactacaggtatatactg
cagctccagttacaggaccatacaggaataacctgggccacagcgtttcaggaagctggt
gaggagataatgggaatgcctgcgaaagatttgtattatatgaagtatgaagatcgggat
gaggacaaattcgaagacatcatccgcaaggctgcgttcaccaagtacatcttcaagctg
aagattaaagaagaaacttatagcgacgaacaacgtgttaaagcaacagttgttaaagcg
gaaaaggtgaactattcttcagataccaggttcctgttggatgcaataaataaactcaga
acagaagatgcaaatcctctccctataaaccaggtgacttccagtcacgggtctggtgca
ttcaactccggcattggaacctcagggaccagagagacgtcatcagtggacgtaccacgc
agagaaattagattacctgcagcaaaccaagtgagtcagtttggcaatgaacacactagc
ggttcaagaccacttggcggtattacttactgtaacgcatgtggtggcaatggtcatgct
gctgacaactgcccaagctttatgagtgagccgcaaggacaacacacgagtagtgcttac
agaagcacaccgggaggatacgcagcaggaggcatgccaaggcaacatgttcgcagctag
DBGET
integrated database retrieval system
