KEGG   Eutrema salsugineum (saltwater cress): EUTSA_v10000821mg
Entry
EUTSA_v10000821mg CDS       T02985                                 
Name
(RefSeq) hypothetical protein
  KO
K24736  WD repeat-containing protein 1 (actin-interacting protein 1)
Organism
eus  Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:eus00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:eus04990]
    EUTSA_v10000821mg
Domain-containing proteins not elsewhere classified [BR:eus04990]
 Other domain-containing proteins
  WD40 repeat (WDR) domain-containing proteins
   EUTSA_v10000821mg
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_EML Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 WDR55 WD40_MABP1-WDR62_2nd WD40_MABP1-WDR62_1st Beta-prop_IFT122_1st Beta-prop_IFT140_1st Beta-prop_RIG_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_WDR35_TULP_N ANAPC4_WD40 NBCH_WD40 WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_WDR75_1st Beta-prop_HPS5 eIF2A Beta-prop_NUP159_NUP214 Beta-prop_DCAF12 Beta-prop_SCAP Beta-prop_Vps41 Beta-prop_EIPR1 RMC1_N KNTC1_N Cytochrom_D1
Other DBs
NCBI-GeneID: 18015997
NCBI-ProteinID: XP_006398521
UniProt: V4L8K4
LinkDB
Position
Unknown
AA seq 612 aa
MAKLVETFPCVPSTERGRGILISGDPKSDSILYCNGRSVLIRSLRRPQDVEVYGEHGYAA
TVARYSPNGEWIASADVSGTVRVWGTHNGFVLKNEFRVLAGRIDDLQWSSDGLRIVASGD
GKGKSLVRAFAWDSGNTMGDFDGHSRRVLSCAFKPTRPFRIATCGEDFLVNFYDGPPFKF
HSSHREHSNFVNCIRYSPDGSKFITVSSDKKGMIYDGKTGDKIGELASEDGHKGSIYAVS
WSPDSKRVLTVSADKSAKVWEVSEDGTVGSVIKTLTFTESGGAEDMLVGCLWQNDHLITV
SLGGTMSLFSADDMDKPPLLLSGHIKNVTSLAVLGANQKTILSCSYDGLIVKWLKGVGYS
CKLQMKDNTKIKRLAATESGILLSGFDNKVWRIPLTDNEFGAADHIDIGHQPLDISIAVD
SPEYTTLVSFDTGVVLLNGLNILSKIDLGFAVAASVISPDGREAIVGGQDGKLHMYSVSV
DNSLKEEAVLEKHRGAVTVIRYSPDSTMFASGDANREAVVWDRETKQVKLNNMLFHTARI
NCLAWSPNNTMVATGSIDTCVIVYEVDKPASSRMTVRNAHLGGVNAVAFVDECTVASSGE
DASVRLWHIEPQ
NT seq 1839 nt   +upstreamnt  +downstreamnt
atggcgaaactcgtcgagacgtttccttgcgttccctccacagaacgaggccggggcatt
ttgatctccggcgaccccaaatccgactccattctctactgtaatggccgctccgtcttg
attcggagcctccggcgaccccaagacgtagaagtctacggagaacatggctatgctgct
accgtggcacgctactctcccaacggggagtggatcgcttccgctgatgtatccggtacg
gttcgagtttggggaacgcacaacgggttcgttcttaagaacgagttcagggtccttgct
ggtcggatcgatgatcttcaatggtcctccgatgggcttcggattgtcgcttccggcgat
ggtaaagggaaatcgcttgttcgagccttcgcatgggactctggcaatacaatgggagat
tttgatggacattctcgtagagttctgagttgtgcctttaaaccaacgagaccttttcga
atcgccacatgtggggaagatttcttagtcaacttttatgatggaccaccttttaagttt
cactcttctcacagggagcattccaactttgtcaactgcatcagatattcacctgatggt
agtaaattcatcaccgtaagctcggataaaaagggcatgatttacgatggcaagactgga
gataaaattggagaactggcctcagaagatggtcacaaaggcagcatctacgctgttagc
tggagccccgacagcaaacgggtgctcactgtttctgctgataagtctgctaaggtatgg
gaggtgtctgaagacggaactgttggttctgtaataaagacattgacgtttacggaatct
ggtggagcagaagacatgcttgtgggatgtctttggcagaacgatcatctcattacagtg
tctcttggcggtaccatgtcgttgttctctgcagatgatatggataagcctccgttgctg
ttatctggacatataaagaacgtcacttctttggctgttcttggggcaaaccagaagacg
attctgtcttgtagctatgacggtcttatagtcaaatggttaaaaggggttggttacagt
tgcaagttacagatgaaagataacaccaaaatcaagcgattagcggctactgaatctggc
attctcttatctggatttgacaacaaggtctggagaattcctttaaccgacaacgaattc
ggagctgcagatcatattgacatcggccatcaacctctggacataagcatagccgtcgat
tcgccagaatacacaacactagtctcgtttgatactggagttgtattgctcaatggtctg
aacattttgagcaagatcgatctgggttttgcggtggcagcctctgtgatctcacctgac
gggagagaagcgatagtaggaggacaagacgggaagttgcacatgtactcagtctcagtg
gataacagcctcaaagaagaagccgtgctggagaaacacagaggtgctgtgacagtgata
cgctactctcctgattcaactatgtttgcttctggtgacgccaaccgcgaagctgttgtc
tgggatcgcgagaccaaacaggtgaagctaaacaacatgttgttccacacggctcgtata
aactgtttggcatggtcacctaacaacacgatggtagccactgggtccatagacacttgc
gtcattgtatatgaagtggacaagccagcttcgagtcgcatgaccgtcagaaacgctcat
ctcggtggagttaacgccgtcgccttcgtcgatgaatgtaccgtagctagttccggtgaa
gacgcttcggttcgtttgtggcatatcgaacctcaatga

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