Eutrema salsugineum (saltwater cress): EUTSA_v10001133mg
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Entry
EUTSA_v10001133mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K18723
nucleoporin GLE1
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03013
Nucleocytoplasmic transport
eus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
EUTSA_v10001133mg
03015 mRNA surveillance pathway
EUTSA_v10001133mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10001133mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
EUTSA_v10001133mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
18016097
NCBI-ProteinID:
XP_006398216
UniProt:
V4L7Q3
LinkDB
All DBs
Position
Unknown
AA seq
442 aa
AA seq
DB search
MRIVSELNSLVSEIDYIEKNLNVFSKNGNKEFIIHVSEDEIDCDEEEEEEEYCEICTAKK
RFAYDEDSYLMINDKSKTKIKEDIQILETEILHETETFRSAMSRVENYREDRRQVERRLD
LQYKRELAESLDTYLTSVQQQRTHQEKEADQRKAAKVKEKLEQETWNNNNGDQAAERSMT
YMLKKLHELEAVNQWLKSRSCKDFSSFEKRIARIIRQICGTEDNVVASTNEILRIFRDPS
CPLSISISAFAKKMVSACGNPFACSYVIVYITSQFPQAMDILLAEFHKACIYTTVPNHNI
ELAWDLDAYKRLDSIMRLYGALVQTDIRCNVHGIEHGWVWLARFLNRTKAHNRATATALN
AFLQTAGFGLYQRYRSQFLKLLSVVREQFLAKLKEEKDVSSSGLQIIINDITAYLDDRMY
IKEPRGRTMLTNLLSRGTNKHQ
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgagaattgtttcagaattgaacagcttggtctctgagattgattatatagaaaagaat
ctcaatgtcttttcaaagaatggtaataaagaattcataatccatgtgtctgaagatgag
attgactgcgatgaagaagaagaagaagaagaatattgtgaaatatgtacagccaagaaa
cgttttgcctacgatgaggattcatatctgatgatcaacgacaagagcaaaaccaaaatc
aaggaagatattcagattcttgaaacagagatattgcacgagactgaaacgtttcgctct
gcaatgtcccgcgttgaaaattacagagaggataggagacaagtggaacgtagacttgat
cttcaatataagcgagaacttgctgaatcactcgatacctatctgacttcagtccaacaa
caacgtacacatcaagaaaaagaagctgatcagagaaaagcagcaaaagtaaaagaaaaa
cttgagcaagagacatggaacaacaataatggtgatcaagctgcggaaagatccatgaca
tacatgttgaagaagcttcacgagttagaagcagtgaaccaatggctaaagtcacgttca
tgtaaagactttagcagctttgagaagcgtatcgcaagaatcataaggcaaatctgcggg
acagaggataacgtagtcgcaagtaccaatgagattctaagaatattcagagacccttct
tgtcccttatccataagtatctcagcttttgcaaagaagatggtttcagcttgtggaaat
ccatttgcttgcagctacgtcatcgtttacatcacctcacagtttccacaagcgatggat
attcttcttgctgaattccacaaagcttgcatttacacaacagtcccaaatcataatatt
gagttagcttgggacttagacgcatataaacgcctagattccattatgagactatacggt
gcacttgtccagactgatattcgctgtaacgttcatgggattgaacacggatgggtttgg
cttgctcggttccttaacagaaccaaagcacacaacagagctaccgcaactgctttaaac
gcgtttctccagaccgcagggtttggtctttatcagaggtacagatctcagttcttgaaa
cttctgagtgttgtcagagagcaattcttggcgaagttgaaggaggaaaaggacgtttct
tcttctggtctgcagattatcataaacgatatcacggcctacttagatgaccggatgtat
atcaaggaacctcgaggaagaactatgctaacgaatcttttgtctaggggaacaaacaag
catcagtaa
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