Eutrema salsugineum (saltwater cress): EUTSA_v10001187mg
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Entry
EUTSA_v10001187mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus00040
Pentose and glucuronate interconversions
eus01100
Metabolic pathways
Module
eus_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
EUTSA_v10001187mg
Enzymes [BR:
eus01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
EUTSA_v10001187mg
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Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Motif
Other DBs
NCBI-GeneID:
18016115
NCBI-ProteinID:
XP_006398122
UniProt:
V4KNW7
LinkDB
All DBs
Position
Unknown
AA seq
307 aa
AA seq
DB search
MEIILRVVFFVNFLYFGFVSGIDYSVLDFGATGDGETDDSKAFVKAWKTMCGDEGDTKTL
LIPSGQTFLLQPLQFRGPCGSSSVIQVPFLSVNGLSIIGTGTINGFGSSFWEEKISKRPT
VLQFHNCNTLNISGITSIDSPRNHISINNCDKVMISNIQLIAPETSPNTDGIDIAASTNI
QISNSVISTGDDCIALKTGSVNINITEVVCGPGHGISIGSLGDKGQEAKVENVQVTHCTF
NKTTNGARIKTWKGGEGYVKHVYFEHITIIDGKNPIIIDQQYKDKGHRVLESEENSADVA
ISNAQIL
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggaaattatactacgagttgtatttttcgtgaattttctatattttggttttgtgagc
ggcatagactacagtgtacttgattttggtgccactggagatggtgaaactgatgattcc
aaggcttttgtaaaagcatggaaaactatgtgtggagatgagggagacacaaaaaccctt
ttgataccctcaggccaaactttcttactccaacctcttcaatttcgtggtccttgtgga
tcttcttctgttattcaggtaccgtttttgagtgtaaacggtttatctatcattggtacg
ggaactatcaatggatttggttcatctttttgggaggaaaaaatatctaaacgcccgacg
gtattgcaatttcataactgtaatacgctcaacataagtggaataacttcgatagacagt
ccgagaaatcatatatcaatcaacaattgtgacaaagttatgatatcaaatatacaactt
attgcacccgaaacaagtcctaacactgatggaatcgatatagctgcctcgactaatatt
caaatatctaattccgtcatttcaactggagatgattgtatagctttaaagactggaagt
gtgaatatcaacattacggaggttgtttgtggacctggtcatggaataagtatcggaagt
ttaggagataagggacaagaagctaaagttgagaacgtccaagtgactcattgcaccttc
aacaagacaaccaatggagccagaatcaaaacttggaagggtggagaaggatacgttaaa
catgtatattttgagcatattaccatcattgatggaaagaatccaattataattgaccaa
caatataaagacaaaggacatcgagttcttgaatcggaagagaattcagctgacgtggcg
attagcaatgcacagattttgtaa
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