Eutrema salsugineum (saltwater cress): EUTSA_v10001411mg
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Entry
EUTSA_v10001411mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
EUTSA_v10001411mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eus03021
]
EUTSA_v10001411mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10001411mg
Transcription machinery [BR:
eus03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
EUTSA_v10001411mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
EUTSA_v10001411mg
PBAF complex
EUTSA_v10001411mg
GBAF(ncBAF) complex
EUTSA_v10001411mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SWIRM
SWIRM-assoc_1
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
18015675
NCBI-ProteinID:
XP_006397957
UniProt:
V4KNC7
LinkDB
All DBs
Position
Unknown
AA seq
505 aa
AA seq
DB search
MEVTDPSWKEAEVELYTIPAQSSWFLWHDIHEIERREFEEFFSESSITRTPKVYKEYRDF
IINKYREDTSRRLTFTSIRKYLVGDVNLLQKVFLFLENWGLINFGSKSDHVLLVENQGKH
KAKIEQGSPPGIRVTATPNSMRPITAPPPVEERAEPGVKLPPLTSYSDVFSDLKKPSDGL
ICGHCGERCDSAFYQHNKSIVNLCEKCFKNGDYGENNSADDFRLNSGNSAAAVWTEEEIL
LLLESVLKHGDDWELIAQSVSSKSRLDCISKLIELPFGEFLMGSASGRLDSSPSHPVEQM
KTDGQETREEKEHHVDEDEPLAKRKRVALISDGDTSLMKQVAAMACKAGPSVTTAAAKAA
IAALCDEASCPKEILETGGYTNLAVDRADGDKDTDMEEEHADKEDLPVALRIRASVATAL
GAAAANAKILADQEEREMEHVAARIIDQQKLESKLKFLDHLELIMDAEEKVMEGVKETIL
QERISVLQCAFGGGITKRWDHTYVK
NT seq
1518 nt
NT seq
+upstream
nt +downstream
nt
atggaagtcactgatccaagctggaaagaagcagaagttgagctctataccatccctgcc
cagtccagttggttcttatggcatgatatacacgaaattgaaagacgcgagtttgaggag
ttcttcagtgagagctcaatcactagaacccccaaagtgtataaagaatatagagatttc
atcatcaataagtacagagaggacacttctaggaggctaaccttcaccagtatccgcaag
tatctcgtgggcgatgtcaacttgcttcagaaagtgtttctcttcctcgaaaattgggga
ttgatcaatttcggctcgaaaagtgatcatgtgttgttggtggagaatcaagggaagcat
aaagctaagatcgagcaagggagcccccctgggattagagttactgcaactccaaattcg
atgaggcctattaccgcaccgccccctgttgaggaacgagctgagcctggtgtcaaatta
ccacctctgacctcttattctgacgttttcagtgatttgaagaagcctagtgatggattg
atttgtgggcattgtggagaacgctgtgattctgctttctaccaacataacaagagtatt
gtcaacttgtgcgaaaagtgtttcaagaatggagactacggggagaacaattccgcagat
gatttcaggttgaattctgggaattctgctgcagctgtgtggaccgaggaagagatcctc
ctcttgctagaatctgtgctgaaacatggagatgattgggaactcattgcacaaagtgtt
tcttcaaagagtagactagattgcatttcgaagctcattgagctcccatttggagagttt
ctgatgggctctgcctctggaagactcgattcctctccatcccatcctgtggaacagatg
aaaactgacggtcaagaaactagggaagaaaaagaacatcacgtggatgaagatgagcct
ctagcaaaaaggaaacgcgttgcactaatatcagacggtgatacttcacttatgaaacag
gttgcagcaatggcatgcaaagctggtccctctgtgacaaccgccgctgcaaaagctgca
attgcagcactttgtgatgaagcctcatgtccaaaagagattctcgaaaccggtggctac
actaatttagcagttgacagagctgatggagacaaagatacagatatggaggaagagcat
gcagacaaagaggatctacctgtagcgttaaggataagagcgtctgtggcaacagctcta
ggagctgcggctgctaacgcgaaaatactggcggatcaagaagaaagggagatggaacat
gtagccgcgagaataatagaccaacagaaactggagagcaagttgaagtttctggaccac
ttggaattgataatggatgcggaagagaaagtgatggaaggtgtaaaggaaacaattctc
caagagaggattagcgtcttgcaatgcgcgtttggtggcggtattaccaaacgttgggat
catacgtacgtgaaataa
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integrated database retrieval system
