Eutrema salsugineum (saltwater cress): EUTSA_v10001879mg
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Entry
EUTSA_v10001879mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K16578
CLIP-associating protein 1/2
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10001879mg
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
eus04812
]
EUTSA_v10001879mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
EUTSA_v10001879mg
Cytoskeleton proteins [BR:
eus04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
CLIP-associating proteins
EUTSA_v10001879mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLASP_N
CEP104-like_TOG
HEAT_EF3_N
XMAP215_CLASP_TOG
HEAT
HEAT_EZ
Vac14_Fab1_bd
TOR1L1_N
PDS5
Cnd1
HEAT_2
TTI1
Tti2
HEAT_Maestro
INTS1_R4
Adaptin_N
MMS19_N
Sec7-like_HUS
HEAT_DAAF5
TPR_TTI1_C
TPR_TTI1_N
MMS19_C
Tra1_ring
SEN1_N
Motif
Other DBs
NCBI-GeneID:
18025716
NCBI-ProteinID:
XP_006408932
UniProt:
V4LIM4
LinkDB
All DBs
Position
Unknown
AA seq
1330 aa
AA seq
DB search
MEEALEMARAKDTKERMAAVERLHQLLEASRKSLSPAEVTSLVDCCLDLLKDSNFRVSQG
ALQALASAAVLAGEHLKLHLNALVPAVVERLGDSKQPVRDAARRLLTTLMEVSSPTIIVE
RAGSYAWMHKSWRVREEFARTVTSAIGLFASTELPLQRVILAPILQMLNDPNQAVREAAI
LCIEEMYMQGGSQFREELQRHHLPSYMVKDINARLERIEPQPRSTDGRSGHHVANETKAS
SVNPKKSSPRAKTSTRENSLFGGDADITEKPIEPIKVYSEKELIREFEKVASTLVPEKDW
AMRISAMRRVEGLVAGGATDYSCFRGLLKQLVGPLSTQLSDRRSTIVKQACHLLCLLSKE
LLGDFEACAEIFIPVLFKLVVITVLVIAESADNCIKTMLRNCKAARVLPRIAESAKHDRN
AILRARCCEYALLTLEHWPDAPEIQRSVDLYEDLIRCCVADAMSEVRATARVCYRMFAKT
WPDRSRRLFSSFDPVIQRLINEDEGGIHRRHASPSVRERHSQPSFSQMSGPSNLPGYGTS
AIVAMDRSSNLSSGGSLSSGLLLSQSKDLNKGSERSLESVLQSSKQKVSAIESMLRGLHV
SDRQNPAALRSSSLDLGVDPPSSRDPPFHASVPASNSLAISTTAESMPSINRGSNRSGGL
GLSDIITQIQASKDSGRQSYRGNLLSESHPSFSSLTAKRGSERSERSSLEDNNDAREARR
FMAGQFDRQQMDTVYKDLTFRDSNASHVPNFQRPLLRKNVGGRMSAGRRRSFDDSQLQVG
DMSNYVDGPASLNEALNDGLNSSSDWCARVSAFNFLQTLLQQGPKGAQEVIQNFEKVMKL
FLRHLDDPHHKVAQAALSTLADLIPSCRKPFESYMERVLPHVFSRLIDPKEVVRQPCSST
LEIVSKTYSVDSLLPALLRSLDEQRSPKAKLAVIEFAINSFNRYAGNPEISGNSGILKLW
LAKLTPLTRDKNTKLKEASITCIISVYNHYDSAGLLNYILSLSVEEQNSLRRALKQYTPR
IEVDLLNYMQSKKEKQRIKSYDPSDAIGTSSEEGYTGASKKNIFLGRYSGGSVDSDSGRK
WSSSQEPTTITGGVGQSVASGTEEKLYHNFRGGISSACDVLNQTDPQYTFTSAGQNLISR
TSPNGSSDNVEILDRLSPPHLEKNGLNMTNTDSLEERHENEVSRELDLSHYMLSSIKVNP
TPESGPSIPQILHRINGSDGSPSSSKISGLQQLIEASVANEESVWTKYFNQILTVVLEVF
DDEDFSVREVALSLISEMLKSQKDAMEDSIEIVIEKLLHVSKDSVPKVTSEAEQCLTTVL
YQYDPFRCLS
NT seq
3993 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggcgctggaaatggcgcgagccaaggacacgaaggagcgcatggcggcggtg
gagcggctgcaccagcttctggaagcttctagaaagagcctgagcccggcggaagtgaca
tcactggttgattgttgtttggatctcctcaaggacagcaatttcagagtctctcagggt
gcgcttcaggcgcttgcttccgccgccgtgctcgccggtgaacatctgaagctccatttg
aacgcgcttgtgcctgccgtcgtggagcggctcggagacagcaaacaaccggttagggat
gcggcgagacgtttgttgacaactctcatggaggtttcatctccgacgattatagttgaa
agagccggttcgtatgcttggatgcataagagttggagagtgcgggaagagtttgcgcgt
actgtcacatcggcaattggtctttttgcatccacggaacttcctctccagcgtgttata
cttgctccgatacttcagatgttaaatgacccgaatcaagcagttagggaagctgcaatt
ctgtgtattgaggagatgtacatgcagggtgggtctcaatttcgggaagagcttcagcgc
caccatcttccatcatatatggtcaaagatattaatgctagactggaacgtattgagcca
caaccgcgttctacagacggtcgtagtggtcatcatgttgctaatgagactaaggcatca
agtgtcaatccaaagaaaagcagtcccagagcaaagacttccacgagagagaactctttg
tttggaggagatgccgacatcaccgaaaaacccatcgagccaatcaaagtgtactcagag
aaggagctgatacgagaatttgagaaagttgcttcaacacttgtcccagagaaagactgg
gcaatgcgtatttcagctatgcggagggttgaaggacttgttgcaggaggtgcgactgat
tactcctgttttcgaggtcttctgaagcaacttgttggtcccttaagtactcagttatct
gatcggaggtctaccattgttaaacaggcttgccatctcttgtgtctcttatcaaaagag
ctactgggagattttgaagcatgcgctgagatctttataccagtgcttttcaagctggtt
gtcatcactgtgcttgtaattgcagaatctgctgataactgcataaaaacgatgctgcgt
aactgcaaagctgcccgcgtacttcctcgcattgctgaatcagcaaaacatgaccgtaat
gcaattttgcgagcaaggtgttgtgaatatgcactgttaacactcgaacattggcctgat
gctccagaaattcagcggtcagttgatttgtacgaagatctgattagatgctgtgttgca
gatgctatgagtgaggtacgggcaactgctagagtgtgctatagaatgtttgcaaaaacc
tggccggatcgttctcgtcgtttgttttcctcctttgaccctgtcattcaaaggttaata
aatgaagacgaaggtggaattcataggaggcacgcctcaccatctgtccgtgagagacac
tcccagccttcattttctcagatgtctggtccatctaatttacctggctatggaacatca
gccatagtcgctatggatagaagttcaaatttgtcctcgggaggatctctttcttctggg
ctactcctatcccaatcaaaggatctcaataaaggttctgaacgtagtctggaaagtgtg
ttacaatcaagcaagcaaaaggtcagtgcaattgaaagtatgctccgaggactgcatgta
tccgatagacagaatcctgcagcccttcgttcgagtagtttggatctaggagttgaccct
ccatcgtctcgtgatcctcctttccatgcttctgttccagcatccaatagtctcgcaatt
agcacgactgctgaatcaatgcctagtatcaacagaggcagtaatcgcagtggtggcctt
ggtttgtcagatatcattacccaaattcaagcttcaaaagactcaggaagacaatcatac
cgtggcaatctgttgtccgagtctcatcctagcttttcatcattgacagctaaacggggt
tcagagagaagtgagagaagttctcttgaggacaacaacgatgccagggaggcgaggcgg
tttatggctggtcaatttgacagacagcagatggataccgtttataaagatttgacattc
agggattcaaacgctagccatgttcccaattttcagaggccacttttgaggaaaaatgtt
ggaggaagaatgtcggcaggcaggaggaggagttttgatgatagtcaactgcaagttggt
gacatgtcaaattatgttgatggtccagcttctctgaacgaggcccttaacgatggactg
aattcaagttctgattggtgtgccagagtttcagcttttaattttctacaaactttgctg
caacaaggcccaaaaggtgctcaagaagtaatccaaaattttgagaaagtaatgaaacta
ttcctccggcacttggatgatcctcaccacaaggttgcacaagcagcactgtcgacactc
gcagatcttataccatcttgccgaaagccgtttgagagctacatggaaagagtcttaccc
catgtgttttcaaggctaatcgatcctaaagaggtagttagacaaccttgctcgtcaacc
ttggaaattgtcagcaaaacctacagtgtagattcccttttacctgcattgctgcgttca
ctggatgagcagagatcaccaaaggctaaattagctgtgatcgaatttgccatcaattcc
ttcaacaggtatgctggtaatcctgaaatttcgggtaatagtggcatcctaaagttgtgg
ctggcaaagttgacaccgttaacccgcgacaaaaataccaagttaaaagaagcttccatt
acttgtatcatatctgtttataatcattatgattctgcgggacttctaaattacattctt
agtttgtcggttgaggagcaaaactccttgagaagagccctcaaacagtatactcctcgc
atcgaggtggacctattaaattatatgcagagtaagaaggagaaacagagaataaaatcc
tatgacccatctgatgccatcgggacatcatctgaagaaggatataccggtgcttccaag
aagaatatattccttggcaggtattctgggggttctgttgacagtgatagtggtaggaag
tggagttcttcccaggagccgacaacgatcactggtggtgttggtcaaagtgttgccagt
ggaactgaggaaaagctgtatcacaacttcagaggtggtataagttctgcttgcgatgtg
ttgaaccaaacggatccccaatacacatttacttcagctggtcagaatttgatatcaaga
actagccctaatggaagctcagacaacgttgagatcttagatagattatctccaccacat
ttggagaaaaatggtctgaatatgacaaacactgattccttggaagaaagacatgaaaat
gaggtctcccgcgaattagatttgagtcactacatgctctcatctattaaggttaaccca
acaccggaatctggacctagcattcctcagattctacataggatcaatgggagtgatgga
agcccttcttcgagcaagatatctggacttcagcaattaattgaagcctctgtagctaac
gaggaatcagtttggaccaagtacttcaatcaaatattgacggttgttcttgaagtgttc
gatgacgaagatttttcagtcagagaagttgctctttcgttgatttctgaaatgctaaag
agccagaaagatgccatggaagattcgattgagatagtgattgagaagctgcttcatgtc
tcgaaggactctgttccaaaagttaccagtgaagctgagcaatgcttgacaacggttttg
taccaatacgatcctttcagatgcttaagttga
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