Eutrema salsugineum (saltwater cress): EUTSA_v10001880mg
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Entry
EUTSA_v10001880mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EUTSA_v10001880mg
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eus02000
]
EUTSA_v10001880mg
Transporters [BR:
eus02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
EUTSA_v10001880mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_assoc
ABC2_membrane_7
AAA_21
ABC_trans_N
AAA_16
AAA
AAA_25
AAA_29
AAA_33
AAA_23
AAA_18
AAA_28
RsgA_GTPase
AAA_30
DnaB_C
RuvB_N
DO-GTPase1
RIMC1
ABC2_membrane_3
Motif
Other DBs
NCBI-GeneID:
18025506
NCBI-ProteinID:
XP_006408607
UniProt:
V4LHS8
LinkDB
All DBs
Position
Unknown
AA seq
1420 aa
AA seq
DB search
MWNSTENAFSRSTSFKDEAEDEEELRWVALQRLPTYSRIRRGIFRDMVGEHKEIRIGNLE
ASEQRLLLDRLVNSVDHDPEQFFARVRKRFDAVDLKFPKIEVRFQDLMVESFVHVGSRAL
PTIPNFIINMAEAFLRNIRLYGAKRSKLTILDNVSGIIRPSRLTLLLGPPSSGKTTLLLA
LAGRLGNNLQTSGKITYNGYNLKEIIAPRTSAYVSQQDWHVAEMTVRQTLEFAGRCQGVG
FKYDMLLELARREKLAGIVPDEDLDIFMKSLALGGQETSLVVEYIMKILGLDTCSDTLVG
DEMIKGISGGQKKRLTTGELLVGPARVLFMDEISNGLDSSTTHQIIMYMRHSTHALEGTT
VISLLQPSPETYELFDDVILMSEGQIIYQGPRDEVLEFFSSLGFSCPERKNVADFLQEVT
SKKDQQQYWSVPFRPYRYVPPGKFAEAFRSFPTGKKLGKKLDVPFDKRFNHSAALSTSQY
GVKRSELLKINFSWQKQLMKQNAFIYVFKFVQLLLVALITMTVFCRTTMHHNTVDDGNIY
LGSLYFSMVIILFNGFTEVPMLVAKLPVLYKHRDLHFYPSWAYTLPSWLLSIPTSIIESA
TWVAVTYYMIGYDPQFSRFLQQFLLYFLLHQMSLGLFRVMGSLGRHMIVANTFGSFAMLV
VMTLGGFIISRDSIPSWWIWGYWISPLMYAQNAASVNEFLGHSWQKSAGNHTSDSLGLAV
LKERSLFSGNYWYWIGIGALLGYTILFNLLFTLFLAYLNPWGKLQAVVSKEELAEREKKR
KGDEFVVELREYLQHSGSLHGKYFKNRGMVLPFQPLSLSFSNINYYVEVPEGLKEQGILE
DKLQLLVNITGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGTIEGDVYISGFPKRQET
FARISGYCEQNDVHSPCLTVVESLLFSACLRLPSDIDSETQRAFVHEVMELVELTSLSGA
LVGLPGVDGLSTEQRKRLTIAVELVANPSIVFMDEPTSGLDARAAAIVMRTVRNIVNTGR
TIVCTIHQPSIDIFESFDELLFMKRGGELIYAGPLGQKSCELIKYFESIEGVQKIKPGHN
PAAWMLDVTSSTEEHRLGVDFAEIYKNSNLCRRNKELIEGLSKPSNVSKELEFPTRYSQS
LYSQFVACLWKQNLSYWRNPQYTAVRFFYTIVISLMLGTICWKFGAKRDTQQQLFNAMGS
MYAAVLFIGITNATAAQPVVSIERFVSYRERAAGMYSALPFAFAQVFIEFPYVLAQSTIY
SSIFYAMASFEWSAVKFLWYLFFMYFSIMYFTFYGMMTTAITPNHNVASIIAAPFYMLWN
LFSGFMIPYKRIPLWWRWYYWANPVAWTLYGLLVSQYGDDEKEVTLSDGVHQVMVKQLLE
DVMGYKHDFLGVSAIMVVAFCVFFSLVFAFAIKAFNFQRR
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgtggaattcgacggagaacgcgttctcgcgttcgacgtcgtttaaagacgaagccgaa
gacgaagaagagcttcgatgggtggcgttgcagcgtttaccgacttattcgcggatccgt
cgcggcattttcagggatatggtcggtgagcataaagagattagaatcggtaacttagaa
gctagcgagcagcgtcttctacttgaccggctcgttaattccgtcgaccatgatcctgaa
cagttcttcgctcgcgtcaggaagagatttgacgcagtggatttgaaatttccaaagatt
gaagttcggtttcaggatttgatggtggaatcattcgttcatgttggaagcagagcatta
ccaacaattcccaatttcatcattaacatggcagaagcctttttaaggaatatccgtctt
tatggtgcgaaaagaagcaaattaaccatcttagacaatgttagcggaatcattagacct
tcgagattaacacttctacttggtcctccgagttccgggaagacaacactactcttagct
ttagctggacgccttggaaataatcttcagacatccgggaagataacatacaatggctac
aatctcaaagagataatcgctccaaggacgtcagcatatgtcagccaacaggattggcat
gtggcagagatgacagtgaggcagactctcgagtttgctggtcgttgtcaaggtgttgga
ttcaaatatgatatgcttttggagctagcaagaagggaaaagcttgcaggaattgtacct
gatgaagatcttgatatatttatgaagtctttagctctcggtggacaggagacaagcctt
gtggtggagtatattatgaagattttaggattggacacatgctcagacacattggtagga
gatgagatgattaaaggaatctcaggagggcagaagaaacggctcacaacaggggaactg
ttagttggtcctgcaagggttcttttcatggatgaaatatcgaatggtttagatagttca
acgactcatcagattatcatgtatatgaggcattctactcatgcgctcgaaggaaccacc
gtcatttccttactccagccttctcccgagacttacgagttattcgatgatgttatcctt
atgtccgagggacagattatttaccagggccctcgtgatgaggttcttgaattcttttca
tcgttgggatttagctgccccgagaggaaaaatgtggcagatttcttgcaagaggtcact
tccaagaaggaccagcagcaatactggtcagtcccttttcggccttatcgctatgtacca
cctggaaagtttgctgaagcatttcgttcatttccgactggtaagaagctgggaaagaaa
cttgacgttccatttgataaacggttcaatcattcagccgctttatcgacatcacaatac
ggtgttaagaggagtgaactactcaagatcaacttttcctggcagaagcaactgatgaag
cagaatgcatttatttatgtgtttaagtttgttcagcttcttttggttgccttgatcacg
atgactgtcttttgccggacaacaatgcatcacaacactgttgatgatggcaacatatat
cttgggtcgctctacttctccatggtcatcattctctttaacgggtttacagaggttcct
atgttagtagccaagcttccggttctttataagcacagagacttgcatttttatccgagc
tgggcttatacgttaccttcctggcttctaagtatccctacctcaataatagagtctgcc
acatgggtggcagttacatattacatgatcggatatgatcctcagttctccaggtttctt
cagcagttcttgctgtatttccttctgcatcagatgtccttgggtcttttccgcgtgatg
ggttctttaggccgacatatgatagttgctaatacgtttgggtcttttgcgatgctggtg
gttatgacgcttggagggtttataatttccagagatagcataccttcctggtggatttgg
ggttactggatttctcctctgatgtatgctcaaaacgccgcttctgtgaacgagttcctc
ggccattcttggcaaaagagtgctgggaatcacacaagcgactctcttggtttggcagtg
ctaaaagaaagaagtttgttctctgggaactactggtattggatcggtatcggtgccttg
cttggatacacaattcttttcaatttgctctttacactgttcctagcttacctcaaccct
tggggtaaattacaagctgtggtatccaaagaagagttggccgaaagagaaaagaaaagg
aaaggcgatgagtttgttgtggaattaagagagtacctgcagcattcaggctcattacat
gggaaatatttcaagaatagaggcatggttctcccgtttcaaccactctctctgtctttc
agcaatatcaattactatgtggaggttccagagggactaaaagaacaagggatactagaa
gataagttgcagctacttgtgaatattactggagcttttagaccaggtgtacttacagct
ttggtgggagttagtggtgccggtaaaacaacgctcatggatgttttagccggaagaaaa
accggtgggacaatcgaaggcgatgtgtacatatctggttttcccaaaaggcaggaaacg
tttgcaagaatctcaggttattgtgagcagaatgatgttcattctccatgcctaactgtt
gttgaatctctacttttctccgcgtgccttcgtttaccatcagacatcgactcagagaca
caaagggcgtttgtccatgaggtgatggagctagtggagctgacttccttgagcggtgct
ttggtgggtctacctggagttgatggcttatcaactgaacagaggaaaaggttaacaatt
gccgtcgagctagttgcaaacccttctatagtattcatggatgagccaacttcaggattg
gatgcaagggctgctgccattgtgatgaggactgtaagaaatattgttaacactggacga
acaatcgtctgcacgatacatcagcctagcattgatatttttgaatcattcgacgagctt
ttgttcatgaaacgtggtggagagctcatatatgctggtccacttggccagaagtcttgt
gagcttatcaagtatttcgagtctattgaaggtgtgcaaaagatcaaacctggtcataat
ccggcagcatggatgcttgacgtcacctcttcgactgaggaacaccggcttggtgttgat
tttgctgaaatttacaagaactcaaatctttgtcgacgcaacaaggagctgatcgaaggc
ctcagcaagccaagtaatgtttctaaagaactcgagtttccaacgagatactctcagtcg
ctctatagtcagtttgttgcttgcctgtggaaacaaaacctgtcatattggagaaaccct
caatacaccgcagttcgcttcttctacaccattgttatctctctaatgcttggaacaata
tgttggaaattcggcgccaaaagagacacccaacaacagttattcaatgctatgggatct
atgtacgccgcggttctcttcattggcatcacaaacgcaaccgctgcgcagcccgttgtt
tccattgaaagatttgtttcataccgcgagcgagcagcgggaatgtactcggcacttccc
tttgcatttgcacaggtctttatagagtttccatacgtgctagcacagtccactatatac
agcagcatattctacgcaatggcctcgtttgaatggtcggcggtgaagttcttgtggtac
ttattcttcatgtacttttcgataatgtacttcaccttctacggaatgatgacaacagca
atcactccaaaccacaacgttgcctcaattatagctgcccctttctacatgttgtggaac
ctcttcagcggtttcatgatcccatacaagaggattcctttgtggtggagatggtactac
tgggcaaaccctgtagcatggacactgtatggtttattggtgtctcagtatggtgatgat
gagaaagaagtgacgctatcagacggtgttcatcaagtgatggtgaaacaacttcttgag
gatgtgatgggatacaaacatgacttcttgggtgtctctgctattatggtcgtcgccttt
tgcgtcttcttctccctcgtctttgctttcgccatcaaagccttcaatttccaaagaaga
tga
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integrated database retrieval system