Eutrema salsugineum (saltwater cress): EUTSA_v10001887mg
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Entry
EUTSA_v10001887mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10001887mg
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
eus00535
]
EUTSA_v10001887mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
EUTSA_v10001887mg
Meiosis-specific proteins
Cohesin complex and associated proteins
EUTSA_v10001887mg
Proteoglycans [BR:
eus00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
EUTSA_v10001887mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
ATG14
TMF_DNA_bd
AAA_29
NAS
Motif
Other DBs
NCBI-GeneID:
18025667
NCBI-ProteinID:
XP_006408638
UniProt:
V4NTQ4
LinkDB
All DBs
Position
Unknown
AA seq
1200 aa
AA seq
DB search
MYIKQVIIEGFKSYKEQVATEDFSPKVNCVVGANGSGKSNFFHAIRFVLSDIFHNLRNED
RHALLHEGAGHQVGSAFVEIVFDNTDNRLLVDKEEIRLRRTIGLKKDEYFLDGKHITKNE
VMNLLESAGFSRANPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESLKIMQ
DTGNKRKQIIQVVQYLDERLRELDEEKEELRKYQQLDKQRKSLEYTINDKELHDTRDKLE
QVEVARTKASEESTKMYDRVEKAQDESRSLDESLKGLAKELQTLNKEKETLEARKTEAIK
KKTKLELDENDFKERIAGNIQSKNDALEQLNMVEREMQDSLKELEAINPLYESQVDKEKQ
TTKRIMELEKKLSILYQKQGRATQFSNKAARDKWLRKEIEDLKRVLDSNLVQEQKLQDEI
FRLNTDLTERDAHIKKYEVEIGELESHISKSHEQFIVKKRERDEEQRKRKEKWGEESELS
SEIEKLKTELERAKKNLDHATPGDVRRGLSSIKRICNEYRINGVFGPLVELVDCEEKFFT
AVEVTAGNSLFHVVVENDEISTKIIRQLNSRKGGRVTFIPLNRVKAPHVNYPQSSDAIPL
LKRLKFDSKFAPAFGQVFGRTVVCRDLNVATRVAKSDGLDCITLEGDQVSRKGGMTGGFY
DHRRSKLRFMNTVIQNTKSIDTKEKVLEDVRRQLQVIDQQITQLVTEQQRLEADWTHSKV
QVEQLKQEIANANKQKHAIHKALENKEKSLSDIRTQIDQLRSSMATKEAEMGTELVDHLT
PEEREQLSRLNPEIKDLKEKLIAYKTDRIERETRKAELETNLSTNLKRRMNELQATISSI
EDDSLPSSAGLKTQELDDAKLLVEEATNELESLCRTIDEKTKQVKKIKDEKAKLKALEDD
CEMTVQDANKKLEELFSIRNSLLAKQEEYTKKIRGLGPLSSDAFDTYRRKNIKELQKMLH
RCSEQLQQFSHVNKKALDQYVNFTEQREELQKRQAELDAGDEKIKELITVLDQRKDESIE
RTFKGVARNFREVFSELVQGGHGHLVMMKKKDRDHDDEDGGREADKEGRVEKYHGVTVKV
SFTGQGETQSMKQLSGGQKTVVALALIFSIQRCDPAPFYLFDEIDAALDPQYRTAVGNMI
RRLADEEVSTQFITTTFRPELVKVADKIYGVFHKNRVSIVNVISKDRALDFIEKDQSHDT
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgtatatcaagcaggttataatcgaaggattcaagagttacaaagagcaagttgctact
gaggatttcagccccaaggttaattgtgttgttggggcaaatgggtctgggaaaagcaac
ttcttccatgcaattcgttttgtgttgagtgacatcttccacaatctgcggaatgaagat
aggcatgcattactccacgaaggtgctggccatcaagttgggtctgcgttcgtggagatt
gtgtttgataatactgacaaccgcctcctggttgataaggaagaaattcgcttacgccga
acaattggtctgaagaaggatgaatatttcttggacgggaaacacattacgaaaaatgaa
gttatgaatttactggagagtgctggattttctcgtgctaatccttactatgttgttcaa
caaggaaagatagcctcgttgacattgatgaaagactcagaacggctggatttgctaaaa
gagattggtggtacccgtgtttatgaggagaggcgccgtgagagtttaaaaattatgcag
gacacagggaataaacgaaagcagatcatccaagttgtccaatacttggatgaaagacta
agggaattggacgaagagaaagaagaactcagaaaatatcaacaacttgacaagcagagg
aaatcactggaatacaccattaacgacaaagagcttcacgatactagggataaactagaa
caggtagaagttgcaagaactaaagcatctgaagagtctacaaaaatgtatgatagagtt
gagaaggcacaggacgagtccaggagcttagatgagtcgctgaaaggactggcaaaggag
cttcagactttgaacaaggagaaagaaactcttgaagcacgaaaaactgaagctataaag
aagaagacaaaactggagcttgatgagaatgactttaaggaacggattgctggaaatatc
cagtctaagaatgatgcccttgagcaacttaatatggtggaaagagaaatgcaagattct
ctgaaggaactagaggcaattaatcctttgtatgaaagtcaagttgacaaggagaagcag
acgacaaaaagaatcatggagctggagaagaagcttagtattctatatcagaaacagggc
cgtgctactcagttttcaaataaggctgcgcgagacaaatggctccggaaggagattgaa
gatcttaagcgtgttctagactcaaatctggttcaagagcaaaaacttcaggatgaaatt
tttcgcctcaatactgatttgacagagcgtgatgcacatatcaagaaatacgaagttgaa
attggtgaactggagtctcacatctccaagtcccatgaacaattcattgttaaaaagagg
gagagagatgaagaacagaggaaaagaaaggaaaaatggggagaagaaagtgaactatct
tctgaaattgagaagttgaaaacggaacttgaaagggcaaagaaaaaccttgatcatgca
actccaggagatgtaaggcgaggtctgagttctatcaaacggatttgcaatgagtatagg
atcaatggagtctttggtccacttgttgagttggttgattgcgaggaaaagttttttact
gcagttgaagtcacagctggaaacagcctatttcacgtggtagttgagaatgatgaaatt
tcaaccaagataatcagacaacttaattctcgaaagggtggacgggtgactttcatacct
ctgaatcgggttaaggcgcctcacgtaaactacccacaaagttctgatgcaataccactg
ctaaaaagattgaagttcgactccaaattcgcaccagcatttggccaggtttttggtaga
acagtagtatgtcgtgatctgaatgtggcaacaagagttgctaaaagtgatggcttggac
tgcataactttggaaggtgaccaggtgagcagaaaaggtggcatgaccggtggcttctat
gaccacaggcgatcaaaattgagatttatgaataccgttatacaaaatacaaagtctata
gatacgaaggagaaggtgttggaggatgttagaagacagctgcaagtgatagatcagcag
atcacacagcttgttactgagcagcagagacttgaagcagactggacgcattccaaagta
caggtggagcaactgaagcaagagatagctaacgcgaataagcagaaacatgctatacat
aaagcccttgaaaataaggagaaatcactaagtgatattagaacacaaattgatcagtta
agatctagcatggccacgaaggaagctgaaatgggaacggaacttgtggatcacctaacc
ccagaagaaagggagcagttgtcacgattaaaccccgaaattaaggatctcaaagaaaaa
cttattgcatacaagacagatcgcattgagagggagacaagaaaagcagagttggagact
aacttgtctaccaacctaaagaggaggatgaatgagttacaggctactatatcttctatc
gaggatgatagtttgcctagttctgctggcttaaaaacacaagaacttgatgatgcaaaa
ctattggttgaagaggccacgaacgagctcgaaagtctctgtcgcaccattgatgagaag
acaaagcaggtcaagaaaattaaagatgagaaagcgaagttaaaggcattggaagatgac
tgtgagatgactgtgcaagatgcaaataaaaagttggaggaactattcagcattcgcaac
tcactccttgccaagcaagaagagtatacaaagaagattaggggattgggtccattgtca
tctgacgcttttgacacgtatagaagaaaaaatatcaaggagctgcagaagatgctacac
cggtgcagtgaacagctacaacaattcagccatgtaaacaagaaagcgcttgaccaatat
gtaaatttcacagaacaaagagaagaacttcagaaacggcaagcagagcttgatgcagga
gatgagaaaattaaagaactgataacggttctggatcagcggaaagatgaatctatagag
cgcactttcaaaggggttgcacgtaacttccgggaagtattctctgagcttgtgcaaggt
ggacatggtcaccttgtcatgatgaagaaaaaggaccgtgatcatgatgatgaagatgga
ggtcgtgaagctgataaagagggacgggttgagaaataccatggtgtaacagtgaaggtg
tcattcactggtcaaggggagacacaatcaatgaaacaattgtcgggaggccaaaagacc
gttgttgccctcgcattaatcttctccatccagcgatgtgatcctgcaccattctatctt
tttgatgagattgatgcggcacttgatcctcagtaccgaaccgctgtcggcaacatgata
cgtcgtttagctgatgaggaggtgagcacacagttcattaccacaactttccgtcctgag
cttgtgaaagttgcggataagatatatggagtatttcataagaacagagtgagtattgta
aatgttatatcaaaggatcgggcgttggactttatcgaaaaagatcagtcccatgatact
tga
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integrated database retrieval system
