Eutrema salsugineum (saltwater cress): EUTSA_v10001902mg
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Entry
EUTSA_v10001902mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K11593
eukaryotic translation initiation factor 2C
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eus03019
]
EUTSA_v10001902mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10001902mg
Messenger RNA biogenesis [BR:
eus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
EUTSA_v10001902mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
EUTSA_v10001902mg
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
EUTSA_v10001902mg
microRNA pathway
RISC loading complex
EUTSA_v10001902mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Piwi
ArgoN
PAZ
ArgoL1
ArgoL2
ArgoMid
Motif
Other DBs
NCBI-GeneID:
18025387
NCBI-ProteinID:
XP_006408675
UniProt:
V4MCD1
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MDSTNGNGTEVESANGSGVADALPPPPPIIPPNVEPVRVKTESVEKKNLRVPIARAGFGS
KGQKIPLLTNHFKVNVANLQGHFYHYSVALFYDDGRPVEQKGVGRKVLDKVHETYHSDLD
GKEFAYDGEKTLFTFGALPSNKMDFAVVLEEVSSARTNGNASPNGNEERSDGDRKRLRRP
NRSKNFRVEISYAAKIPLQALANAMRGQESEMSQEAIRVLDIILRQHAARQGCLLVRQSF
FHNDPSNCEPVGGNILGCRGFHSSFRTTQGGMSLNMDVTTTMIIKPGPVVDFVIANQGAK
DPFSCDWSKAKRTLKNLRIKVSPSNQEYRITGMSDKLCKDQMFEYRPRNATKNENGEYET
VEITVAEYFRNEKNLELQYSANLPCINVGKPKKPTYIPLELCSLIPLQRYTKALNTFQRS
ALVEKSRQKPQERMNVLSKALKVSNYDTEPLLRSCGISISSNFTQVEGRVLPAPKLKMGC
GDELFPRNGRWNFNNKQFFEPTKIEKWAVANFSARCNVRQLVDDLIRIGGSKGIKIDIPF
DVFEENHTLRRAPALVRVEKMFEEIQSKLPGAPQFLLCLLPERKNCDIYGPWKRKNLTEY
GIVTQCMAPTRQPNDQYLTNCLLKINAKLGGLNSVLSVERTPAFTVISKVPTIILGMDVS
HGSPGQSDVPSIAAVVSSRQWPLISKYRASVRTQPSKAEMIESLFKKNGTEDDGIIKELL
VDFYTSSGKRKPEHIIIFRDGVSESQFNQVLNIELDQIMEACKLLDENWDPKFLVLVAQK
NHHTKFFQTSSPDNVPPGTIIDNKICHPNNYDFYLCAHAGMIGTTRPTHYHVLFDDIHFS
PDELQELVHSLSYVYQRSTTAISVVAPICYAHLAAAQLGTFMKFEDQSETSSSHGGVTAP
GPISVAQLPRLKDNVANSMFFC
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggattctactaacggtaatggaactgaggttgaatcagcaaacgggagcggggttgct
gatgcattgccccctcctccaccaatcatacctcccaatgttgagccagtacgagtaaaa
accgaatctgttgagaaaaaaaacctgagagtccctattgctcgggctgggtttggatcc
aagggccaaaagataccactgttgacaaatcatttcaaagtcaacgttgctaatcttcaa
ggacatttctaccactacagtgtggctctattttatgatgatggtcgtcctgttgagcaa
aagggcgttggaagaaaagttctggacaaggttcacgagacataccactctgatctagat
ggcaaagagtttgcctatgatggagaaaagacactcttcacttttggagcgttgcctagt
aacaagatggactttgctgtggtgcttgaggaagtatcttcagccaggactaacggaaac
gcaagtcccaatgggaacgaagagcgaagtgatggtgatagaaaaagactgcgccggcct
aaccgttccaaaaactttagagtggagatcagctatgcggccaagattcctcttcaagct
cttgcgaatgctatgcgtggtcaggaatcagagatgtcccaggaagcaataagagtttta
gatatcatcttacgtcaacatgctgctagacaaggctgccttcttgtgcgacagtcattc
ttccacaatgacccgagcaactgtgagcctgttggtggtaacatcctggggtgtagagga
ttccattcaagtttccgaacaacacagggtggcatgtcccttaacatggatgttacaacc
acaatgataatcaagcctggtccggttgttgactttgtcattgctaaccaaggtgcaaag
gatccgtttagttgtgactggtctaaggcaaaaaggactctgaagaacctgaggattaaa
gtcagcccctcaaaccaggagtacaggatcactggcatgagtgacaagctttgcaaggat
cagatgtttgaatataggccaaggaatgcaacaaagaatgaaaatggtgagtacgaaact
gttgaaataacagtagctgagtacttcagaaatgaaaagaatctggagctgcaatattct
gcgaatctaccgtgcatcaatgttgggaagccaaagaaaccaacttatattcctcttgag
ctctgctctctgattccccttcagaggtacacaaaagcactgaacacattccaaagatct
gcccttgttgagaaatctagacagaagccccaagagaggatgaatgttctgtctaaggcc
ctgaaagtgagcaactatgacactgaacccctcctgcgttcctgtggcatttctatcagc
tctaattttactcaggtggaaggtcgtgttctgccagctcccaagctgaaaatgggatgc
ggagatgaactgtttccgcgaaacggtcgctggaatttcaacaacaagcaattttttgag
ccaaccaagattgaaaaatgggctgttgcaaatttttctgcgcgctgtaatgtacgtcaa
cttgttgatgatttgatccgaattggaggatctaaaggaattaaaatcgatattcccttt
gatgtgtttgaggagaatcatactcttcgccgtgctcctgcccttgttcgtgtggagaag
atgtttgaggaaatccaatctaaactcccaggtgctccacagttcctattatgtctgctc
cccgagaggaagaactgcgacatatatggcccttggaagagaaaaaacctcactgaatac
ggcattgttactcaatgcatggctccaacgcgacaacctaatgatcaatatcttacaaac
tgtcttctgaagatcaatgccaagcttggaggcctgaactcagtgttaagcgttgagcgt
acacctgccttcacagtcatttccaaggttccaaccataatccttgggatggatgtttct
cacggatctccaggacagtctgatgtcccgtccattgctgctgtggtgagttctagacag
tggcctctaatctctaaatacagagcatctgttcgcacacagccttcaaaggctgagatg
attgagtcccttttcaagaaaaatggaaccgaagatgatggcataatcaaggagttgctg
gtagatttctacacgagctcgggtaagagaaagccagagcatatcataattttcagggat
ggtgttagtgaatctcagttcaatcaggttctaaacattgaactcgaccagataatggag
gcttgcaagctcttggatgagaattgggacccaaagttccttgtgttggtggctcaaaag
aatcaccacaccaagtttttccagactagctctcctgacaacgttcctccagggacgata
atcgataacaagatctgtcaccctaataactacgatttctatctctgtgcacacgccgga
atgattggaacaactcgtcctacacattaccatgtcctgtttgatgacatccatttttca
cctgatgaacttcaagaacttgtccactctctctcctacgtgtaccaaagaagcaccact
gccatttctgttgttgcgccgatctgctatgctcacttggccgctgctcagctaggaacg
ttcatgaagtttgaagatcaatctgagacgtcatcaagccacggtggtgtgacagctcca
ggaccaatttctgtggcgcagctcccgagactcaaagacaacgtcgccaattccatgttc
ttctgttag
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