Eutrema salsugineum (saltwater cress): EUTSA_v10002440mg
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Entry
EUTSA_v10002440mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K12736
peptidylprolyl isomerase domain and WD repeat-containing protein 1 [EC:
5.2.1.8
]
Organism
eus
Eutrema salsugineum (saltwater cress)
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
eus03041
]
EUTSA_v10002440mg
03110 Chaperones and folding catalysts [BR:
eus03110
]
EUTSA_v10002440mg
Enzymes [BR:
eus01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
EUTSA_v10002440mg
Spliceosome [BR:
eus03041
]
Complex C
Other components
PPlases
EUTSA_v10002440mg
Chaperones and folding catalysts [BR:
eus03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
EUTSA_v10002440mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pro_isomerase
Beta-prop_WDR5
Beta-prop_THOC3
WD40
Beta-prop_WDR3_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
WDR55
Beta-prop_EML_2
Beta-prop_EML
Beta-prop_TEP1_2nd
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_CAF1B_HIR1
Beta-prop_IFT140_1st
WD40_Gbeta
Beta-prop_Vps41
Beta-prop_WDR19_2nd
Beta-prop_WDR35_TULP_N
Motif
Other DBs
NCBI-GeneID:
18013677
NCBI-ProteinID:
XP_006419120
UniProt:
V4MYD9
LinkDB
All DBs
Position
Unknown
AA seq
631 aa
AA seq
DB search
MEEESQNGNVIPAKELAVAAATAVAPEVDEEETMIGPAPRGKRKRPLQFEQAYLDSLPSA
NMYEKSYMHRDVVTHVAVSAADFFISGSMDGHLKFWKKKGVGIEFAKHFRSHLGPIEGLA
VSIDGLLCCTISNDHAVKIYDVVNYDMMAMIRLPYIPGAVEWVFKQGDVKAKLAVSDRNS
SFVHIYDPRSGSNEPIASKEIHSSPIKVMKYNPVSDTMISGDTKGIIEYWSPTTLQFPED
EVNFKLKSDTNLYEIIKCKTAISAIEVSPDGRQFSVTSPDRRIRVFWFRTGKLRRVYDES
LEVAQDLQRSDAPLYRLEAIDFGRRMAVEKEFEKTESAPQPNAVFDESSNFLIYATLLGI
KIINLHTNTVARILGKVESNERFLRVALYQGDQGGKKVRKIPAAAANVNESKEPLTDPTI
LCCAFKKHRIYMYSRREPEEPEDASQGRDVFNEKPAPDELMAASDIGNSATTSLPENVIM
HTTMGDMHIKLYPEECPKTVENFTTHCRNGYYDNHLFHRVIKGFMIQTGDPLGDGTGGQS
IWGREFEDEFHKSLRHDRPFTVSMANAGQNTNGSQFFITTVATPWLDNKHTVFGRVVKGM
DVVQGIEKVKTDKNDRPYQDVKILNVTVPKS
NT seq
1896 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaatctcagaatggaaacgtgattccggctaaagaattggcggtggctgcg
gcgacggcggtagcgcctgaagtagacgaggaagagacgatgattggtcccgctccacgc
ggcaaacgcaagcgtccgcttcagttcgaacaagcttaccttgattcgcttccttctgct
aatatgtatgagaaaagttatatgcatcgggatgtagttacgcatgttgctgtttcagca
gctgatttcttcataagtggaagcatggatggtcacttgaaattttggaagaaaaaaggt
gttgggatcgagtttgctaagcatttccgctcccatctcggtccaattgaaggtctagcg
gttagcattgacggattgctttgctgtacaatctcaaatgatcatgctgttaaaatatat
gatgttgtcaactacgacatgatggccatgatccgtttaccatatattcctggtgctgtt
gaatgggttttcaaacaaggggatgtcaaagctaaacttgctgttagtgatcgaaactca
tcgtttgtgcacatttatgatccccgttctggttccaacgagccaattgcttcaaaagag
atacattcaagtccaattaaggtcatgaagtacaatcctgtttctgacacaatgatctct
ggtgacaccaaaggaatcattgagtactggagtccaactacgctgcaatttcctgaggat
gaggtaaactttaagctgaagagtgatacaaatctatatgagattataaagtgcaaaaca
gccatctctgccattgaggtgagtccggatggtagacaattttctgttacatctcctgat
cgtagaattcgagtgttctggtttagaactggaaaactgaggcgggtttatgacgagtca
cttgaggtggcccaagatctgcagaggagcgatgctccattgtacaggcttgaagcaatt
gattttggtcgaagaatggcagttgagaaggaatttgaaaaaaccgagagcgctccacag
cccaatgccgttttcgatgaaagctctaatttccttatatatgccacacttcttggaata
aaaataataaatttacacaccaacacagttgcaaggatccttggaaaggtggagagcaat
gagaggtttctgagagttgcattatatcaaggtgatcaaggaggcaagaaagttagaaag
attccagcagccgcagcaaatgtaaatgaaagcaaagagcctttaactgatccaactatc
ttatgctgcgctttcaagaaacacaggatctatatgtacagtcggagagagcctgaagaa
cctgaagatgcaagccaagggagggatgtgtttaacgagaagcctgctcctgatgaactt
atggctgcctcagatattggaaactcagctacaacatctcttccagagaacgtgatcatg
catactacgatgggtgacatgcacataaagctttacccagaagaatgtcccaaaaccgtg
gaaaacttcacaacacactgtagaaacggctattacgataaccaccttttccaccgtgtt
atcaagggattcatgatacagactggagatcctcttggggatggtaccggaggacagtca
atttggggcagagaattcgaggacgagtttcataaaagtctacggcatgataggccgttc
acagtttcaatggcaaatgctggtcaaaacacaaatgggtcacaattctttatcacgacg
gtggcgacaccgtggctagacaataagcatacagtttttggaagagtcgtcaagggaatg
gacgtcgtacagggtatagagaaagtgaagacagacaagaacgacaggccttaccaagat
gttaagatacttaatgtcactgttcctaaatcttag
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