Eutrema salsugineum (saltwater cress): EUTSA_v10002840mg
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Entry
EUTSA_v10002840mg CDS
T02985
Name
(RefSeq) hypothetical protein
KO
K03363
cell division cycle 20, cofactor of APC complex
Organism
eus
Eutrema salsugineum (saltwater cress)
Pathway
eus04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
eus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
EUTSA_v10002840mg
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
eus04121
]
EUTSA_v10002840mg
03036 Chromosome and associated proteins [BR:
eus03036
]
EUTSA_v10002840mg
Ubiquitin system [BR:
eus04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
APC/C
Target recognizing subunit
EUTSA_v10002840mg
Chromosome and associated proteins [BR:
eus03036
]
Eukaryotic type
Sister chromatid separation proteins
APC/C complex
EUTSA_v10002840mg
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WDR55
Beta-prop_WDR19_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_2nd
ANAPC4_WD40
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_HPS5
Beta-prop_EIPR1
RMC1_N
Beta-prop_WDR75_1st
Ge1_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_SPT8
WDR90_beta-prop_4th
eIF2A
Beta-prop_RIG_1st
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_IFT80_2nd
Motif
Other DBs
NCBI-GeneID:
18013595
NCBI-ProteinID:
XP_006419087
UniProt:
V4LCP8
LinkDB
All DBs
Position
Unknown
AA seq
416 aa
AA seq
DB search
LDRFIPNRSAMDFDYAHFALMEGRKVEGKEQVSSSPSREAYNKQLAETMNLNRTRILAFR
NKPQVPVKPYSASLLHQQPKSVKPQRRHIPQTSERTLDAPDLVDDFYLNLLDWGSANVLA
IALDHTVYLWDASSGSTSELVTIDEEKGPVTSVNFALDGRNLAVGLNNSEVQIWDSEASR
KLRTLKGHHSRVGSLAWNNHVLTTGGLDGQIIDNDVRIRSHVVGTYRGHSQEVCGLKWSG
SGQHLASGGNDNVVHVWDRCSTTQWLHRLEEHTAAVKALAWCPFQSSLLATGGGGGDRTI
KLWNNRTGACLNSIDTGSQVSSLLWSKNERELLSSHGFTQNQLTLWKYPSMVKMAELTGH
TSRVLYMAQSPDGCTVASAAGDETLRFWNVFGVPDTAKKSAPKPVAEPFSHVNRIR
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
cttgacaggttcataccaaacagatcagccatggatttcgactatgctcacttcgcgctc
atggaaggaagaaaagtggaaggaaaagaacaggtaagttcatcaccatccagagaagcc
tacaacaagcaactcgccgagacgatgaatctgaaccggacacggattcttgcatttagg
aacaaacctcaagttccagtcaaaccgtactctgcttctcttcttcaccagcaacctaaa
tccgtaaagccgcaacgtagacacatccctcagacttccgagagaacgttagatgcacca
gaccttgtggatgacttttatctcaacttgcttgactggggaagtgctaatgttttagcc
atagctctggatcatactgtatatctctgggatgcttcaagtggttctacttctgagctt
gtgaccattgatgaagagaaggggcctgtcacaagtgttaactttgcacttgatggtcgt
aatcttgcagttgggctcaacaactctgaagtccagatatgggattctgaagccagccgt
aaactgaggacattgaagggtcaccactcgagagtaggatcattggcgtggaacaatcat
gtcttaacaacgggagggttggacgggcagatcattgacaatgatgtacggatcagatca
cacgtcgtgggaacctacaggggtcacagtcaagaggtttgtgggttgaagtggtcaggc
tccggacagcatttagccagcggtggcaacgacaatgtggttcacgtatgggaccgttgt
tccaccacgcaatggctgcacaggcttgaggaacacacagctgcggttaaagctcttgct
tggtgccctttccaatcgagtttgcttgcgactggtggtggtggaggagataggacgata
aagctttggaataaccggacaggagcttgcttgaattcgatagacactggctcccaagtt
tcttctttgttatggagcaagaatgaaagagagttgcttagctctcatgggtttactcag
aaccagcttacactttggaagtatccgtcaatggtgaaaatggcggagctcactggtcat
acatcgagggttctgtatatggctcagagtccagatggttgtactgtagcctctgcagca
ggagacgagacactgagattttggaatgtttttggagtaccagacaccgccaagaaatct
gctccaaaacccgttgctgagccgttttctcatgtgaatcgtattcgttga
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